Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MIR5006-201ENST00000583027 110 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 SNRPGP17-201ENST00000603780 214 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 AC100812.1-201ENST00000607622 580 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.28□□□□□ -2.04
LRRC53A6NM62 TCL6_2.1-201ENST00000615162 119 ntBASIC2.28□□□□□ -2.04
LRRC53A6NM62 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
LRRC53A6NM62 BX322639.1-202ENST00000423987 2213 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LRRC53A6NM62 Y_RNA.106-201ENST00000363189 100 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 RNU6-99P-201ENST00000364721 107 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 MIR190B-201ENST00000401119 79 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 MTCO2P27-201ENST00000420740 428 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 MTCYBP10-201ENST00000424905 650 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.27□□□□□ -2.05
LRRC53A6NM62 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.27□□□□□ -2.05
LRRC53A6NM62 AP000870.1-201ENST00000472927 406 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 AL049873.1-201ENST00000480540 376 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 RNA5SP54-201ENST00000516951 92 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.27□□□□□ -2.05
LRRC53A6NM62 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.27□□□□□ -2.05
LRRC53A6NM62 AC026470.2-201ENST00000561492 181 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 AC009127.3-201ENST00000570531 403 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 AL031274.2-201ENST00000599419 203 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 AC025754.2-201ENST00000606491 432 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.27□□□□□ -2.05
LRRC53A6NM62 AC104985.2-201ENST00000620598 500 ntBASIC2.27□□□□□ -2.05
LRRC53A6NM62 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.27□□□□□ -2.05
LRRC53A6NM62 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.27□□□□□ -2.05
LRRC53A6NM62 RNU6-222P-201ENST00000362438 107 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 Y_RNA.509-201ENST00000384506 99 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 AL357139.1-201ENST00000407792 426 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.26□□□□□ -2.05
LRRC53A6NM62 AF228730.4-201ENST00000421457 183 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 AC092423.1-201ENST00000430165 186 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 AC236972.2-201ENST00000434979 310 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 AC093303.1-201ENST00000514549 295 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 RNU6-470P-201ENST00000515954 104 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 RNU6-264P-201ENST00000517134 104 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 AC004584.2-201ENST00000570407 410 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 SNRPGP20-201ENST00000604477 205 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 RPL17P51-201ENST00000605218 238 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 MIR1244-1-201ENST00000612829 85 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 AC133104.2-201ENST00000615272 193 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 AC126177.8-201ENST00000618339 1015 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 MIR1244-3-201ENST00000635744 85 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 MIR1244-2-201ENST00000636449 85 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 MIR1244-4-202ENST00000636813 85 ntBASIC2.26□□□□□ -2.05
LRRC53A6NM62 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LRRC53A6NM62 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LRRC53A6NM62 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LRRC53A6NM62 SNORD115-3-201ENST00000363100 82 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 RNU6-159P-201ENST00000391080 106 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 RNA5SP270-201ENST00000411361 118 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 AC022028.1-201ENST00000412054 408 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 SRIP3-201ENST00000413200 219 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.25□□□□□ -2.05
LRRC53A6NM62 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.25□□□□□ -2.05
LRRC53A6NM62 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.25□□□□□ -2.05
LRRC53A6NM62 RNU7-152P-201ENST00000458982 64 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.25□□□□□ -2.05
LRRC53A6NM62 AC008549.1-201ENST00000512900 643 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 RNU6-1198P-201ENST00000516904 67 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 AP006437.1-201ENST00000641440 3685 ntBASIC2.25□□□□□ -2.05
LRRC53A6NM62 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
LRRC53A6NM62 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LRRC53A6NM62 RNU6-545P-201ENST00000362681 104 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 RNU6-137P-201ENST00000363680 108 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 RNU6-873P-201ENST00000363833 107 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 Y_RNA.187-201ENST00000363918 113 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 RNA5SP138-201ENST00000365098 114 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 XGY1-201ENST00000381172 446 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 SNORA51.11-201ENST00000384442 131 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 MIR10B-201ENST00000385011 110 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 MIR634-201ENST00000385208 97 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LRRC53A6NM62 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LRRC53A6NM62 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.24□□□□□ -2.05
LRRC53A6NM62 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.24□□□□□ -2.05
LRRC53A6NM62 RNU7-87P-201ENST00000459343 62 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 SNORA25.14-201ENST00000516481 132 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 RNU7-193P-201ENST00000516723 65 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 RNU1-40P-201ENST00000516816 164 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 RNA5SP137-201ENST00000516833 135 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 RNU1-97P-201ENST00000516872 164 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.24□□□□□ -2.05
LRRC53A6NM62 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.24□□□□□ -2.05
LRRC53A6NM62 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.24□□□□□ -2.05
LRRC53A6NM62 SNRPGP18-201ENST00000553000 214 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 SUB1P3-201ENST00000564581 315 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 AC002984.1-201ENST00000591692 448 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.24□□□□□ -2.05
LRRC53A6NM62 MTND5P16-201ENST00000460269 1703 ntBASIC2.24□□□□□ -2.05
LRRC53A6NM62 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LRRC53A6NM62 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LRRC53A6NM62 SNORD31B-201ENST00000364977 69 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 RNU6-438P-201ENST00000365561 103 ntBASIC2.23□□□□□ -2.05
LRRC53A6NM62 MIR559-201ENST00000385188 96 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms