Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 TPRKBP2-201ENST00000565969 475 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 AL671309.1-201ENST00000603750 544 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 AC246785.4-201ENST00000605374 287 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 AC009268.2-201ENST00000621925 457 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 RNU6-40P-201ENST00000384254 107 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 MIR29B2-201ENST00000385055 81 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 MIR653-201ENST00000385279 96 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 MIR1827-201ENST00000408549 66 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 STAG3L5P-204ENST00000443759 179 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 RNA5SP94-201ENST00000516917 108 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 AC013828.2-201ENST00000532487 235 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 MRPS36P5-201ENST00000551909 298 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 AC004223.2-201ENST00000590309 544 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 AC131159.1-201ENST00000621854 213 ntBASIC-1.18□□□□□ -2.6
NRXN3Q9Y4C0 MIR1-1-201ENST00000362147 71 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 MIR655-201ENST00000362159 97 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 RNU6-31P-201ENST00000384388 108 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 RNU6-658P-201ENST00000384606 106 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 CBX3P9-201ENST00000402326 552 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 AC093012.1-202ENST00000549403 582 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 uc_338.19-201ENST00000616808 99 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 SEPT14P17-201ENST00000617978 177 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 SCARNA4-202ENST00000625402 129 ntBASIC-1.19□□□□□ -2.6
NRXN3Q9Y4C0 RNU4-27P-201ENST00000410889 139 ntBASIC-1.2□□□□□ -2.6
NRXN3Q9Y4C0 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.2□□□□□ -2.6
NRXN3Q9Y4C0 AL353997.1-201ENST00000432936 108 ntBASIC-1.2□□□□□ -2.6
NRXN3Q9Y4C0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.2□□□□□ -2.6
NRXN3Q9Y4C0 MTND4P9-201ENST00000507819 1346 ntBASIC-1.2□□□□□ -2.6
NRXN3Q9Y4C0 MIR4300-201ENST00000581016 96 ntBASIC-1.2□□□□□ -2.6
NRXN3Q9Y4C0 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 SNORD114-25-201ENST00000363742 72 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 MIR1298-201ENST00000408783 112 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 Y_RNA.597-201ENST00000410463 100 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 CCDC58P2-201ENST00000417131 366 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 RPS15AP10-201ENST00000432472 382 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 MTCYBP15-201ENST00000433123 1127 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 AC245047.8-201ENST00000456455 284 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 MTND5P13-201ENST00000513046 1079 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 RNU6-202P-201ENST00000515998 96 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 RNA5SP216-201ENST00000516111 123 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 AC138869.1-201ENST00000568623 124 ntBASIC-1.21□□□□□ -2.6
NRXN3Q9Y4C0 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 AC069271.1-201ENST00000445577 156 ntBASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 AL163973.1-201ENST00000484753 577 ntBASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 RNU7-129P-201ENST00000516128 62 ntBASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 RNU6-881P-201ENST00000516813 102 ntBASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 RNU2-60P-201ENST00000517290 128 ntBASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 AC023824.3-201ENST00000569003 562 ntBASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 VN1R83P-201ENST00000595685 445 ntBASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-1.22□□□□□ -2.6
NRXN3Q9Y4C0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.22□□□□□ -2.61
NRXN3Q9Y4C0 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.22□□□□□ -2.61
NRXN3Q9Y4C0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.22□□□□□ -2.61
NRXN3Q9Y4C0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-1.22□□□□□ -2.61
NRXN3Q9Y4C0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-1.22□□□□□ -2.61
NRXN3Q9Y4C0 RPL32P14-201ENST00000463196 378 ntBASIC-1.22□□□□□ -2.61
NRXN3Q9Y4C0 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.22□□□□□ -2.61
NRXN3Q9Y4C0 AC104820.1-201ENST00000624183 307 ntBASIC-1.22□□□□□ -2.61
NRXN3Q9Y4C0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 USP9YP11-201ENST00000427537 717 ntBASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 FO393419.3-201ENST00000428741 282 ntBASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 MTND3P19-201ENST00000603825 345 ntBASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 AL355598.1-201ENST00000604169 202 ntBASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 AC245008.1-201ENST00000608123 476 ntBASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 AC106754.1-201ENST00000562632 1513 ntBASIC-1.23□□□□□ -2.61
NRXN3Q9Y4C0 ENSAP3-201ENST00000312710 333 ntBASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 SNORA36.1-201ENST00000363424 132 ntBASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 RNU6-811P-201ENST00000384069 107 ntBASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 AL500527.2-201ENST00000454105 95 ntBASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 RNU1-86P-201ENST00000516108 154 ntBASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 RNU1-107P-201ENST00000516617 154 ntBASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 AC090049.2-201ENST00000550377 109 ntBASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 AC106754.2-201ENST00000623006 233 ntBASIC-1.24□□□□□ -2.61
NRXN3Q9Y4C0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.25□□□□□ -2.61
NRXN3Q9Y4C0 MIR760-201ENST00000390220 80 ntBASIC-1.25□□□□□ -2.61
NRXN3Q9Y4C0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
NRXN3Q9Y4C0 MTCO1P21-201ENST00000416634 589 ntBASIC-1.25□□□□□ -2.61
NRXN3Q9Y4C0 USP9YP21-201ENST00000420603 432 ntBASIC-1.25□□□□□ -2.61
NRXN3Q9Y4C0 AC005042.3-201ENST00000453230 174 ntBASIC-1.25□□□□□ -2.61
NRXN3Q9Y4C0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.25□□□□□ -2.61
NRXN3Q9Y4C0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-1.25□□□□□ -2.61
NRXN3Q9Y4C0 OR8K2P-201ENST00000524645 927 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms