Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 MTND3P9-201ENST00000429526 346 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 HSPE1P21-201ENST00000438283 308 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 RPL23AP6-201ENST00000446637 472 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 U8.21-201ENST00000459536 136 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AC096745.1-201ENST00000509945 370 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 FAM206BP-201ENST00000510179 541 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AC005741.1-201ENST00000511094 432 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-567P-201ENST00000516746 107 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 MTND1P5-201ENST00000517906 940 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 MTND1P35-201ENST00000526739 508 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 EIF4A1P12-201ENST00000551910 141 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AC243960.4-201ENST00000600532 288 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AP000654.2-201ENST00000605633 586 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AC009994.1-201ENST00000606889 253 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 U4.5-201ENST00000617137 123 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-661P-201ENST00000362409 107 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU5B-2P-201ENST00000363036 113 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 SNORD115-3-201ENST00000363100 82 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 U3.9-201ENST00000363823 204 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.373-201ENST00000365600 103 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-128P-201ENST00000383976 107 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 U8.10-201ENST00000384260 133 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-1215P-201ENST00000384441 102 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 MIR1287-201ENST00000408492 90 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 MTND2P29-201ENST00000438595 412 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 AC245102.2-201ENST00000448956 180 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 HMGN2P18-201ENST00000450680 270 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 RPS29P25-201ENST00000481709 171 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 MTCO1P29-201ENST00000496868 288 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 AC087441.2-201ENST00000529141 262 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 AC026371.1-201ENST00000551867 419 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 AC109446.1-201ENST00000566172 220 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 AC090517.2-201ENST00000614966 680 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 AL136221.1-201ENST00000621449 509 ntBASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU1-58P-201ENST00000362413 163 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 U8.1-201ENST00000362843 134 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.89-201ENST00000363031 102 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.135-201ENST00000363439 95 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 SNORA29-201ENST00000384183 140 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.530-201ENST00000384587 101 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 RNA5SP465-201ENST00000391195 109 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU2-41P-201ENST00000410991 178 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 VN1R36P-201ENST00000414936 291 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 MTCO3P18-201ENST00000440206 761 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 ATP5EP1-201ENST00000510257 156 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 SUB1P3-201ENST00000564581 315 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 AL133215.3-201ENST00000609801 448 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 AL138726.1-201ENST00000614873 333 ntBASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42EP4Q9H3Q1 MIR340-201ENST00000362125 95 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-1252P-201ENST00000363054 104 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-534P-201ENST00000364877 106 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AL357139.1-201ENST00000407792 426 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-321P-201ENST00000410912 106 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AP1B1P2-201ENST00000416196 106 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 ZNF885P-201ENST00000420174 1098 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AL513185.2-201ENST00000425543 193 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AC092473.1-201ENST00000441098 221 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU7-187P-201ENST00000458985 68 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 TRBVA-201ENST00000498804 316 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AC114801.2-201ENST00000503825 781 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 RNA5SP490-201ENST00000517141 136 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AC015720.1-201ENST00000565251 277 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 MIR8076-201ENST00000611401 83 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AC090617.10-201ENST00000624308 134 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 MIR3688-2-201ENST00000636963 87 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 AC068137.4-201ENST00000638485 296 ntBASIC1.41□□□□□ -2.18
CDC42EP4Q9H3Q1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms