Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTX3P26022 Y_RNA.16-201ENST00000362421 102 ntBASIC3.09□□□□□ -1.91
PTX3P26022 SNORA72.2-201ENST00000365028 127 ntBASIC3.09□□□□□ -1.91
PTX3P26022 Y_RNA.477-201ENST00000384352 108 ntBASIC3.09□□□□□ -1.91
PTX3P26022 RAB28P5-201ENST00000427490 651 ntBASIC3.09□□□□□ -1.91
PTX3P26022 AC107222.1-201ENST00000510899 637 ntBASIC3.09□□□□□ -1.91
PTX3P26022 Y_RNA.673-201ENST00000516306 88 ntBASIC3.09□□□□□ -1.91
PTX3P26022 DEFB131C-201ENST00000528817 165 ntBASIC3.09□□□□□ -1.91
PTX3P26022 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
PTX3P26022 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.09□□□□□ -1.91
PTX3P26022 AC008739.3-201ENST00000603262 127 ntBASIC3.09□□□□□ -1.91
PTX3P26022 AC022441.3-201ENST00000605737 136 ntBASIC3.09□□□□□ -1.91
PTX3P26022 AC078938.1-201ENST00000620993 318 ntBASIC3.09□□□□□ -1.91
PTX3P26022 AC068205.3-201ENST00000636385 468 ntBASIC3.09□□□□□ -1.91
PTX3P26022 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTX3P26022 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.09□□□□□ -1.92
PTX3P26022 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
PTX3P26022 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PTX3P26022 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.08□□□□□ -1.92
PTX3P26022 RNU6-727P-201ENST00000363592 107 ntBASIC3.08□□□□□ -1.92
PTX3P26022 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTX3P26022 Y_RNA.515-201ENST00000384535 112 ntBASIC3.08□□□□□ -1.92
PTX3P26022 MIR183-201ENST00000384958 110 ntBASIC3.08□□□□□ -1.92
PTX3P26022 SNORD58.1-201ENST00000391313 66 ntBASIC3.08□□□□□ -1.92
PTX3P26022 RNU4-30P-201ENST00000410245 143 ntBASIC3.08□□□□□ -1.92
PTX3P26022 RNA5SP344-201ENST00000411081 104 ntBASIC3.08□□□□□ -1.92
PTX3P26022 AC004866.1-201ENST00000411748 78 ntBASIC3.08□□□□□ -1.92
PTX3P26022 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.08□□□□□ -1.92
PTX3P26022 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.08□□□□□ -1.92
PTX3P26022 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
PTX3P26022 RNU2-31P-201ENST00000516954 155 ntBASIC3.08□□□□□ -1.92
PTX3P26022 SCARNA20.6-201ENST00000517251 106 ntBASIC3.08□□□□□ -1.92
PTX3P26022 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.08□□□□□ -1.92
PTX3P26022 AC010620.2-201ENST00000600135 313 ntBASIC3.08□□□□□ -1.92
PTX3P26022 BX284668.6-201ENST00000606899 438 ntBASIC3.08□□□□□ -1.92
PTX3P26022 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
PTX3P26022 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
PTX3P26022 AL590240.4-201ENST00000616908 390 ntBASIC3.08□□□□□ -1.92
PTX3P26022 U1.39-201ENST00000621562 146 ntBASIC3.08□□□□□ -1.92
PTX3P26022 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.08□□□□□ -1.92
PTX3P26022 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTX3P26022 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTX3P26022 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTX3P26022 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTX3P26022 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTX3P26022 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.07□□□□□ -1.92
PTX3P26022 AC092435.3-201ENST00000565538 3654 ntBASIC3.07□□□□□ -1.92
PTX3P26022 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTX3P26022 RNU6-1264P-201ENST00000383891 107 ntBASIC3.07□□□□□ -1.92
PTX3P26022 Y_RNA.569-201ENST00000384749 103 ntBASIC3.07□□□□□ -1.92
PTX3P26022 SNORA12-201ENST00000391162 147 ntBASIC3.07□□□□□ -1.92
PTX3P26022 SNORA26.7-201ENST00000391288 122 ntBASIC3.07□□□□□ -1.92
PTX3P26022 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
PTX3P26022 RNU6-1328P-201ENST00000410938 106 ntBASIC3.07□□□□□ -1.92
PTX3P26022 RPL30P4-201ENST00000429309 333 ntBASIC3.07□□□□□ -1.92
PTX3P26022 YME1L1P1-201ENST00000429435 297 ntBASIC3.07□□□□□ -1.92
PTX3P26022 RPS12P18-201ENST00000442381 270 ntBASIC3.07□□□□□ -1.92
PTX3P26022 AC005042.3-201ENST00000453230 174 ntBASIC3.07□□□□□ -1.92
PTX3P26022 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
PTX3P26022 AC080013.2-201ENST00000460866 323 ntBASIC3.07□□□□□ -1.92
PTX3P26022 AC008155.2-201ENST00000464337 397 ntBASIC3.07□□□□□ -1.92
PTX3P26022 AC140059.1-201ENST00000489238 361 ntBASIC3.07□□□□□ -1.92
PTX3P26022 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.07□□□□□ -1.92
PTX3P26022 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.07□□□□□ -1.92
PTX3P26022 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.07□□□□□ -1.92
PTX3P26022 U2.14-201ENST00000615943 113 ntBASIC3.07□□□□□ -1.92
PTX3P26022 AC006001.4-201ENST00000622243 395 ntBASIC3.07□□□□□ -1.92
PTX3P26022 AC090517.3-201ENST00000625170 141 ntBASIC3.07□□□□□ -1.92
PTX3P26022 MIR3674-201ENST00000636576 68 ntBASIC3.07□□□□□ -1.92
PTX3P26022 U6.105-201ENST00000637379 88 ntBASIC3.07□□□□□ -1.92
PTX3P26022 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTX3P26022 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PTX3P26022 Z82209.1-201ENST00000422141 2135 ntBASIC3.07□□□□□ -1.92
PTX3P26022 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PTX3P26022 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.06□□□□□ -1.92
PTX3P26022 RNU1-72P-201ENST00000362976 153 ntBASIC3.06□□□□□ -1.92
PTX3P26022 Y_RNA.286-201ENST00000364813 102 ntBASIC3.06□□□□□ -1.92
PTX3P26022 Y_RNA.331-201ENST00000365267 102 ntBASIC3.06□□□□□ -1.92
PTX3P26022 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
PTX3P26022 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.06□□□□□ -1.92
PTX3P26022 Y_RNA.415-201ENST00000384012 112 ntBASIC3.06□□□□□ -1.92
PTX3P26022 MIR7-3-201ENST00000384898 110 ntBASIC3.06□□□□□ -1.92
PTX3P26022 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.06□□□□□ -1.92
PTX3P26022 Y_RNA.597-201ENST00000410463 100 ntBASIC3.06□□□□□ -1.92
PTX3P26022 RNA5SP475-201ENST00000410568 110 ntBASIC3.06□□□□□ -1.92
PTX3P26022 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PTX3P26022 NDUFB4P10-201ENST00000452541 359 ntBASIC3.06□□□□□ -1.92
PTX3P26022 HMGB3P17-201ENST00000504195 649 ntBASIC3.06□□□□□ -1.92
PTX3P26022 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.06□□□□□ -1.92
PTX3P26022 MIR2682-201ENST00000580305 110 ntBASIC3.06□□□□□ -1.92
PTX3P26022 AC105245.1-201ENST00000581934 244 ntBASIC3.06□□□□□ -1.92
PTX3P26022 AC008749.1-201ENST00000597650 306 ntBASIC3.06□□□□□ -1.92
PTX3P26022 MIR7975-201ENST00000619350 68 ntBASIC3.06□□□□□ -1.92
PTX3P26022 AC008873.1-201ENST00000625051 138 ntBASIC3.06□□□□□ -1.92
PTX3P26022 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTX3P26022 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTX3P26022 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTX3P26022 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTX3P26022 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTX3P26022 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms