Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.26□□□□□ -1.89
SHISA3A0PJX4 RNU6-271P-201ENST00000363858 105 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 RNU6-818P-201ENST00000364837 108 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 RNU4-11P-201ENST00000365287 132 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 SNORA22C-201ENST00000384614 134 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 RNA5SP354-201ENST00000391247 136 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 MIR1283-1-201ENST00000408494 87 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 RNU6-735P-201ENST00000410612 107 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 Y_RNA.629-201ENST00000411368 105 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 RPL23AP7-203ENST00000449021 469 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.26□□□□□ -1.89
SHISA3A0PJX4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 AC091167.1-201ENST00000492017 396 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 SCARNA8-201ENST00000515924 131 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.26□□□□□ -1.89
SHISA3A0PJX4 MIR4765-201ENST00000585007 77 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 MIR3138-201ENST00000585238 82 ntBASIC3.26□□□□□ -1.89
SHISA3A0PJX4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.26□□□□□ -1.89
SHISA3A0PJX4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.26□□□□□ -1.89
SHISA3A0PJX4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.26□□□□□ -1.89
SHISA3A0PJX4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.26□□□□□ -1.89
SHISA3A0PJX4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SHISA3A0PJX4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.26□□□□□ -1.89
SHISA3A0PJX4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 AC009487.4-201ENST00000624969 3585 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 MIR30E-201ENST00000362104 92 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 RNU6-486P-201ENST00000363116 107 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 Y_RNA.572-201ENST00000384757 98 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 MIR1294-201ENST00000408503 142 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 AC004975.1-201ENST00000428733 208 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 HMGN2P7-201ENST00000456186 273 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 RNU6-453P-201ENST00000516819 85 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 AC008011.1-201ENST00000545989 227 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 MIR4753-201ENST00000585119 83 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 AL020997.2-201ENST00000602607 184 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 MIR548AY-201ENST00000617669 107 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 AL445567.2-201ENST00000618935 498 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.25□□□□□ -1.89
SHISA3A0PJX4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHISA3A0PJX4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AC100821.1-201ENST00000523153 2479 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 RNU6-199P-201ENST00000362954 107 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 Y_RNA.229-201ENST00000364347 113 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 RNU6-643P-201ENST00000384018 107 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AL139095.1-201ENST00000404326 391 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 HSPE1P21-201ENST00000438283 308 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AL121914.1-201ENST00000450188 156 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AC245047.8-201ENST00000456455 284 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AC010401.1-201ENST00000463867 348 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 RPL36AP21-201ENST00000490372 323 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 MIR4474-201ENST00000579189 78 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AC244505.7-201ENST00000599675 272 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 AL365222.1-201ENST00000614661 98 ntBASIC3.24□□□□□ -1.89
SHISA3A0PJX4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.24□□□□□ -1.89
SHISA3A0PJX4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
SHISA3A0PJX4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
SHISA3A0PJX4 AC058791.1-201ENST00000608412 3198 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHISA3A0PJX4 RNA5SP130-201ENST00000364431 114 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 RNU6-728P-201ENST00000365375 104 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 RNY3P5-201ENST00000384127 102 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 MIR15B-201ENST00000385045 98 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.23□□□□□ -1.89
SHISA3A0PJX4 RPL23AP58-201ENST00000440453 469 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 AL358232.1-201ENST00000448030 501 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 RNU7-57P-201ENST00000459540 60 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 RPS27P26-201ENST00000494583 239 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 SNORA25.12-201ENST00000516202 82 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 RNU7-115P-201ENST00000516433 55 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 AP003730.1-201ENST00000524605 285 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 AC090517.3-201ENST00000625170 141 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 snoZ196.1-201ENST00000625269 89 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 AC068724.3-201ENST00000625906 87 ntBASIC3.23□□□□□ -1.89
SHISA3A0PJX4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHISA3A0PJX4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHISA3A0PJX4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHISA3A0PJX4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHISA3A0PJX4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms