Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 AC015688.6-201ENST00000577737 104 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 MIR4753-201ENST00000585119 83 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 NIFKP6-201ENST00000598115 845 ntBASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.3□□□□□ -2.2
LRRC40Q9H9A6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 SNORA11.2-201ENST00000408318 127 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 MIR1283-1-201ENST00000408494 87 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 COX6CP10-201ENST00000416832 224 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 CST2P1-201ENST00000425770 87 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 RN7SKP210-201ENST00000459176 261 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 RNU7-138P-201ENST00000459479 64 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 RNU6-612P-201ENST00000516909 102 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 DEFB131C-201ENST00000528817 165 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 Z94722.1-201ENST00000604328 474 ntBASIC1.29□□□□□ -2.2
LRRC40Q9H9A6 BX322639.1-202ENST00000423987 2213 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 RNU4-62P-201ENST00000410125 130 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 EIF1P1-201ENST00000421436 341 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 MTCYBP8-201ENST00000422855 651 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 RPS29P29-201ENST00000456396 171 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 RNU2-34P-201ENST00000516534 121 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 RNU6-323P-201ENST00000521915 107 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 AL391840.1-201ENST00000571144 367 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 AL353149.1-201ENST00000610667 244 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 AC005562.2-201ENST00000618264 111 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 AL353997.5-201ENST00000618886 171 ntBASIC1.28□□□□□ -2.2
LRRC40Q9H9A6 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 RNU7-63P-201ENST00000459054 62 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 RNU6-1037P-201ENST00000459571 107 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 ARL2BPP4-201ENST00000506854 471 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 MTND4P7-201ENST00000523876 130 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 RAB11AP2-201ENST00000545905 639 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 AC090115.3-201ENST00000553218 849 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 CYP3A52P-201ENST00000563326 91 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 AC040904.1-201ENST00000590850 223 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 AL355802.3-201ENST00000607571 545 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 uc_338.34-201ENST00000617467 174 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 MIR338-201ENST00000636369 67 ntBASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LRRC40Q9H9A6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 RNU6-227P-201ENST00000362865 103 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 RNA5SP219-201ENST00000390940 113 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 AC009474.2-201ENST00000451383 136 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 RNU7-95P-201ENST00000459222 64 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 RNU7-180P-201ENST00000459240 63 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 RPS26P45-201ENST00000471748 340 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 RNU6-948P-201ENST00000516374 107 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 RNU6-430P-201ENST00000517078 107 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 AC016256.1-201ENST00000547971 354 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 MIR4709-201ENST00000577272 72 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 MIR5006-201ENST00000583027 110 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 AC104458.1-201ENST00000608243 463 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 AC109347.2-201ENST00000610220 349 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 AL359697.1-201ENST00000624879 587 ntBASIC1.26□□□□□ -2.21
LRRC40Q9H9A6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 Y_RNA.159-201ENST00000363674 87 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 RNU6-996P-201ENST00000365438 107 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 MIR194-1-201ENST00000384892 85 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 AC004965.1-201ENST00000413033 213 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 SNX2P2-201ENST00000424553 323 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 USP9YP14-201ENST00000430663 563 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 AL031667.1-201ENST00000440222 725 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 AC004386.2-201ENST00000441858 148 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 AC016717.1-201ENST00000448918 286 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 AL163195.1-201ENST00000496941 348 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 RRN3P3-201ENST00000549207 578 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 MTATP6P24-201ENST00000576835 677 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
LRRC40Q9H9A6 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
LRRC40Q9H9A6 SNORA4.2-201ENST00000365313 147 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 451.8 ms