Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 AK3P2-201ENST00000507976 429 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.700-201ENST00000516806 100 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 SNORA31.19-201ENST00000517079 126 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 AC022559.1-201ENST00000520905 205 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 AC021269.2-201ENST00000532318 330 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 MED28P6-201ENST00000558776 231 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 AC002545.1-201ENST00000592511 181 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 AC008121.1-201ENST00000603244 268 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 AC107294.1-201ENST00000609524 467 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNHG28P0DPA3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RNU6-682P-201ENST00000363843 106 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.200-201ENST00000364018 102 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.270-201ENST00000364693 104 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 Z98749.2-208ENST00000381646 500 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RNU6-47P-201ENST00000383866 107 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RNU6-318P-201ENST00000384283 103 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RNY3P4-201ENST00000384428 101 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.506-201ENST00000384494 102 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 MIR487A-201ENST00000385009 80 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RNA5SP213-201ENST00000391031 106 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 MIR1298-201ENST00000408783 112 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RN7SKP51-201ENST00000410781 304 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AL627311.1-201ENST00000431514 115 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AC018634.1-201ENST00000437554 401 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AC092798.1-201ENST00000458542 409 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RNU7-87P-201ENST00000459343 62 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RPL30P1-201ENST00000488676 339 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AC091874.1-201ENST00000511402 339 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RNU1-41P-201ENST00000516161 162 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RNU1-48P-201ENST00000516400 162 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 SCARNA15.2-201ENST00000516409 127 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 RNU6-143P-201ENST00000516942 93 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AC007536.1-201ENST00000533382 349 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AC025281.1-201ENST00000567026 265 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AC104581.2-201ENST00000572227 430 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 MIR5007-201ENST00000583098 95 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AC011921.3-201ENST00000605540 361 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 AC004852.3-201ENST00000614131 326 ntBASIC2.75□□□□□ -1.97
SNHG28P0DPA3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SNHG28P0DPA3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SNHG28P0DPA3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SNHG28P0DPA3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 SNORD113-8-201ENST00000363497 74 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 SNORA26.7-201ENST00000391288 122 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AL358453.1-201ENST00000422522 250 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AC096920.1-201ENST00000423991 241 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AC104332.1-201ENST00000440471 797 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AL513124.1-201ENST00000450410 614 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.644-201ENST00000459006 113 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 U8.21-201ENST00000459536 136 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 RNU4-71P-201ENST00000516258 113 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.674-201ENST00000516362 113 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AC010186.2-204ENST00000537668 439 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AC093023.1-201ENST00000547375 507 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 MIR4782-201ENST00000577987 79 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 MIR4659A-201ENST00000580269 81 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AC013412.1-201ENST00000610687 192 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 AC064859.1-201ENST00000624741 174 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 U4.7-201ENST00000638126 106 ntBASIC2.74□□□□□ -1.97
SNHG28P0DPA3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SNHG28P0DPA3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.73□□□□□ -1.97
SNHG28P0DPA3 AC093010.3-201ENST00000570269 15214 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 MIR21-201ENST00000362134 72 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 RNU6-545P-201ENST00000362681 104 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 RNU6-227P-201ENST00000362865 103 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 SNORD81.1-201ENST00000363064 77 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SNHG28P0DPA3 COX6CP10-201ENST00000416832 224 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.73□□□□□ -1.97
SNHG28P0DPA3 AC007919.1-201ENST00000429380 217 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.73□□□□□ -1.97
SNHG28P0DPA3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.73□□□□□ -1.97
SNHG28P0DPA3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.73□□□□□ -1.97
SNHG28P0DPA3 AL031659.1-201ENST00000447075 539 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNHG28P0DPA3 AC010285.1-201ENST00000470580 392 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 RPS23P5-201ENST00000495419 428 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 AC008413.1-201ENST00000511864 177 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 SNORD116-28-201ENST00000516123 91 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 SNORA31.6-201ENST00000516241 130 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 RNA5SP24-201ENST00000516478 95 ntBASIC2.73□□□□□ -1.97
SNHG28P0DPA3 RNU6-572P-201ENST00000516724 80 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms