Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.83□□□□□ -2.12
HDAC3O15379 AC005741.1-201ENST00000511094 432 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.83□□□□□ -2.12
HDAC3O15379 RNU5B-3P-201ENST00000516601 115 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RNA5SP384-201ENST00000516615 116 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RNU6-612P-201ENST00000516909 102 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 RNU1-54P-201ENST00000517181 120 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.83□□□□□ -2.12
HDAC3O15379 CBX3P7-201ENST00000532876 502 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 AP001836.1-201ENST00000604675 523 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 AC019193.3-201ENST00000609144 554 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 SNORA43.4-201ENST00000629559 138 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 ZNF702P-202ENST00000434269 1966 ntBASIC1.83□□□□□ -2.12
HDAC3O15379 HAUS6P2-201ENST00000433254 2404 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HDAC3O15379 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.82□□□□□ -2.12
HDAC3O15379 Y_RNA.11-201ENST00000362375 109 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 Y_RNA.48-201ENST00000362710 103 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RNU6-43P-201ENST00000384302 107 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RNU6-331P-201ENST00000384724 107 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 MIR544A-201ENST00000384855 91 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AL033519.2-201ENST00000403958 392 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RNA5SP425-201ENST00000410336 112 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RNU2-2P-201ENST00000410396 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AL354751.2-201ENST00000415471 210 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AL135786.1-201ENST00000415892 214 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AL158823.1-201ENST00000418441 478 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.82□□□□□ -2.12
HDAC3O15379 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.82□□□□□ -2.12
HDAC3O15379 AL591043.1-201ENST00000432461 424 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.82□□□□□ -2.12
HDAC3O15379 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.82□□□□□ -2.12
HDAC3O15379 AC007677.1-201ENST00000445757 515 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 PCMTD1P1-201ENST00000455560 355 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RPL30P15-201ENST00000457129 321 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RNU6-1037P-201ENST00000459571 107 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RN7SL429P-201ENST00000479090 223 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 FO393415.2-201ENST00000480085 343 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RN7SL489P-201ENST00000486185 223 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RN7SL327P-201ENST00000488659 223 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.82□□□□□ -2.12
HDAC3O15379 HMGN1P13-201ENST00000505795 138 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.82□□□□□ -2.12
HDAC3O15379 SMURF2P1-201ENST00000514992 481 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 Y_RNA.701-201ENST00000516812 110 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.82□□□□□ -2.12
HDAC3O15379 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.82□□□□□ -2.12
HDAC3O15379 AC105245.1-201ENST00000581934 244 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.82□□□□□ -2.12
HDAC3O15379 U2.15-201ENST00000611544 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.16-201ENST00000613119 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.12-201ENST00000613778 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.20-201ENST00000613956 192 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.9-201ENST00000615427 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.11-201ENST00000616345 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.2-201ENST00000616535 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RN7SL853P-201ENST00000617250 223 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.3-201ENST00000617785 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.19-201ENST00000618602 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 RNU2-1-201ENST00000618664 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.6-201ENST00000619225 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.5-201ENST00000619465 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 U2.10-201ENST00000620268 191 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AL160413.1-201ENST00000622780 310 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 AC090574.1-201ENST00000623186 233 ntBASIC1.82□□□□□ -2.12
HDAC3O15379 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.82□□□□□ -2.12
HDAC3O15379 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.82□□□□□ -2.12
HDAC3O15379 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
HDAC3O15379 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HDAC3O15379 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HDAC3O15379 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.81□□□□□ -2.12
HDAC3O15379 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HDAC3O15379 U8.2-201ENST00000363156 134 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 RNU6-529P-201ENST00000363383 104 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 RNU6-890P-201ENST00000384121 107 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 Y_RNA.460-201ENST00000384255 102 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 RNU6-790P-201ENST00000384479 105 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 MIR218-1-201ENST00000384999 110 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 MTCYBP4-201ENST00000401524 249 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 RPS20P15-201ENST00000412792 311 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.81□□□□□ -2.12
HDAC3O15379 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.81□□□□□ -2.12
HDAC3O15379 AC008267.5-201ENST00000424928 265 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 RPL30P4-201ENST00000429309 333 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.81□□□□□ -2.12
HDAC3O15379 AL353705.4-201ENST00000449661 238 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 RNU7-152P-201ENST00000458982 64 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.81□□□□□ -2.12
HDAC3O15379 AC079598.5-201ENST00000547460 117 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.81□□□□□ -2.12
HDAC3O15379 AC109446.1-201ENST00000566172 220 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 MIR1273D-201ENST00000577266 86 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 AC024614.2-201ENST00000577584 372 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.81□□□□□ -2.12
HDAC3O15379 AC044792.1-201ENST00000593294 196 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 VN1R107P-201ENST00000601784 209 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms