Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNU6-4P-201ENST00000384205 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-5P-201ENST00000384238 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-3P-201ENST00000384314 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-16P-201ENST00000384385 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-15P-201ENST00000384534 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-2-201ENST00000384627 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-29P-201ENST00000384637 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-9-201ENST00000384776 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-33P-201ENST00000384793 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 SNORA3.2-201ENST00000408221 125 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 PGBD4P6-201ENST00000421501 610 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 AL358176.2-201ENST00000425769 204 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 TOMM20P4-201ENST00000427861 435 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 AL121890.1-201ENST00000435457 205 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 Y_RNA.687-201ENST00000516558 91 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-699P-201ENST00000517081 110 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-988P-201ENST00000519081 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 CR383656.8-201ENST00000549046 145 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 MIR4680-201ENST00000580906 66 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 RNU6-6P-201ENST00000606623 107 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 MIR5739-201ENST00000619803 80 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.49□□□□□ -2.01
DDX43Q9NXZ2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 MIR21-201ENST00000362134 72 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 RNU1-72P-201ENST00000362976 153 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 RNU6-487P-201ENST00000365430 104 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 MIR1261-201ENST00000408659 82 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 RNU6-293P-201ENST00000411259 106 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 AC138623.1-201ENST00000418060 216 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 AL160004.2-201ENST00000432935 350 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 AL139109.1-201ENST00000455491 297 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 AC140059.1-201ENST00000489238 361 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 AC008737.2-201ENST00000599446 118 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 U4atac.1-201ENST00000618345 95 ntBASIC2.48□□□□□ -2.01
DDX43Q9NXZ2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 RNU6-490P-201ENST00000362985 107 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 Y_RNA.158-201ENST00000363651 101 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 SNORA70B-201ENST00000384210 135 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 Z98742.3-201ENST00000418637 326 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 EIF4EP4-201ENST00000424916 578 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 AC008267.5-201ENST00000424928 265 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 RPS15AP28-201ENST00000435088 386 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 MTND3P2-201ENST00000438452 342 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 DAP3P1-201ENST00000441522 278 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 PCMTD1P1-201ENST00000455560 355 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 CYP2C59P-201ENST00000457790 269 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 AC090515.1-201ENST00000465295 476 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 CKS1BP2-201ENST00000497342 240 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 AC021146.2-201ENST00000504736 556 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 AC022493.2-201ENST00000506122 481 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 AC109446.1-201ENST00000566172 220 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 MIR5007-201ENST00000583098 95 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 Z82209.1-201ENST00000422141 2135 ntBASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
DDX43Q9NXZ2 AC005336.3-201ENST00000623833 2679 ntBASIC2.46□□□□□ -2.01
DDX43Q9NXZ2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 Y_RNA.2-201ENST00000362330 96 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 RNU6-1010P-201ENST00000362757 107 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 RNA5SP240-201ENST00000365355 128 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 RNU6-827P-201ENST00000365553 106 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 RNU6-1105P-201ENST00000384774 107 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 Y_RNA.645-201ENST00000391229 102 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 MRPL42P3-201ENST00000401492 326 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 MIR548F4-201ENST00000408515 105 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 MRPS18CP6-201ENST00000423587 223 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 MTND5P22-201ENST00000458380 195 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 RPL23AP49-201ENST00000492925 468 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 AC022447.4-201ENST00000504053 364 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 ANXA2P1-201ENST00000505539 926 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 RNU1-41P-201ENST00000516161 162 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 RNU1-48P-201ENST00000516400 162 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 Y_RNA.720-201ENST00000517166 92 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 SUB1P3-201ENST00000564581 315 ntBASIC2.46□□□□□ -2.02
DDX43Q9NXZ2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms