Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SNORA18.6-201ENST00000516792 115 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 AC069113.1-201ENST00000517763 267 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 AC008147.4-201ENST00000617570 1204 ntBASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
CCNB1IP1Q9NPC3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR378A-201ENST00000362177 66 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-562P-201ENST00000362731 107 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-877P-201ENST00000383868 107 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU2-29P-201ENST00000410423 189 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 AC133104.1-201ENST00000429100 218 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU7-95P-201ENST00000459222 64 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 DEFB131C-201ENST00000528817 165 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 AL359757.2-201ENST00000624309 274 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 AC009161.2-201ENST00000624626 138 ntBASIC1.13□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-456P-201ENST00000384493 107 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR300-201ENST00000401138 83 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 TOMM22P2-201ENST00000430735 237 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU7-167P-201ENST00000459160 62 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AC011406.1-201ENST00000512440 370 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU2-34P-201ENST00000516534 121 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 RNA5SP384-201ENST00000516615 116 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AP003033.1-201ENST00000527244 415 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AP002963.1-201ENST00000530590 184 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AL050343.2-201ENST00000607338 280 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AL360219.1-201ENST00000610230 366 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AL157834.3-201ENST00000615543 103 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 AC126177.8-201ENST00000618339 1015 ntBASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCNB1IP1Q9NPC3 RNA5SP327-201ENST00000362494 101 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-545P-201ENST00000362681 104 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 SNORA18.2-201ENST00000383865 132 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 SNORA40.6-201ENST00000391153 128 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 PIGFP2-201ENST00000421400 651 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 AC013410.2-201ENST00000422627 201 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 AC016256.1-201ENST00000547971 354 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 CYP3A52P-201ENST00000563326 91 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 NIFKP6-201ENST00000598115 845 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 AP000942.3-201ENST00000603702 160 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR338-201ENST00000636369 67 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 BX322639.1-202ENST00000423987 2213 ntBASIC1.11□□□□□ -2.23
CCNB1IP1Q9NPC3 FGF7P2-201ENST00000332473 296 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-181P-201ENST00000363225 107 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-418P-201ENST00000384035 107 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR1283-1-201ENST00000408494 87 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AC004965.1-201ENST00000413033 213 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 BTF3P4-201ENST00000418852 495 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 MTCO2P3-201ENST00000442543 421 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 RPS29P29-201ENST00000456396 171 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AC004223.1-201ENST00000479840 271 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AL133373.1-201ENST00000497098 94 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AC091435.1-201ENST00000505442 584 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AC010486.2-201ENST00000505572 483 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 RNA5SP458-201ENST00000516188 119 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-445P-201ENST00000516949 107 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AL137161.1-201ENST00000532231 390 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AL512310.8-201ENST00000550183 120 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AC090115.3-201ENST00000553218 849 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR3908-201ENST00000579798 126 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 MIR4769-201ENST00000584126 77 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 AL353770.2-201ENST00000620024 78 ntBASIC1.1□□□□□ -2.23
CCNB1IP1Q9NPC3 SNORA70.7-201ENST00000384159 133 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-331P-201ENST00000384724 107 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.09□□□□□ -2.23
CCNB1IP1Q9NPC3 BX295541.1-201ENST00000417774 250 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 563.7 ms