Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SNORA12-201ENST00000391162 147 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.58□□□□□ -2.16
NPAS2Q99743 C8orf59P1-201ENST00000429930 303 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 SNAP23P1-201ENST00000433229 246 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.58□□□□□ -2.16
NPAS2Q99743 MTND1P1-201ENST00000445453 368 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.58□□□□□ -2.16
NPAS2Q99743 RNU6-261P-201ENST00000459506 102 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 MTCO3P38-201ENST00000468910 766 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.58□□□□□ -2.16
NPAS2Q99743 AC019235.1-201ENST00000503847 207 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 Y_RNA.693-201ENST00000516641 110 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 RNU6-835P-201ENST00000516974 104 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 AC090115.3-201ENST00000553218 849 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 AL512360.1-201ENST00000555346 234 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 MIR4498-201ENST00000577599 66 ntBASIC1.58□□□□□ -2.16
NPAS2Q99743 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.58□□□□□ -2.16
NPAS2Q99743 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NPAS2Q99743 SNORD114-6-201ENST00000364393 72 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 RNU4-66P-201ENST00000365199 138 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 RNU6-827P-201ENST00000365553 106 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 Y_RNA.378-201ENST00000365652 113 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
NPAS2Q99743 RNU6-38P-201ENST00000384085 107 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 SNORD73A-201ENST00000386062 65 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 RNA5SP201-201ENST00000410316 124 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AC123900.1-201ENST00000420390 96 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 NCOR1P3-201ENST00000420479 303 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AL590135.1-201ENST00000422215 156 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AC019205.3-201ENST00000424573 156 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.57□□□□□ -2.16
NPAS2Q99743 RPL23AP95-201ENST00000426806 265 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AC016700.2-201ENST00000446011 156 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 TPTE2P5-203ENST00000458118 728 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 SNRPGP7-201ENST00000469016 106 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AC015911.1-201ENST00000495111 156 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.57□□□□□ -2.16
NPAS2Q99743 MIR449C-201ENST00000516047 92 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.57□□□□□ -2.16
NPAS2Q99743 AC103996.1-201ENST00000555468 102 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.57□□□□□ -2.16
NPAS2Q99743 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.57□□□□□ -2.16
NPAS2Q99743 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 VN1R80P-201ENST00000597126 338 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AC107304.1-201ENST00000604229 296 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 RNU6-85P-201ENST00000605989 107 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AC015540.1-201ENST00000615828 501 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 AC073534.2-201ENST00000620377 381 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.57□□□□□ -2.16
NPAS2Q99743 AC099654.12-201ENST00000639868 649 ntBASIC1.57□□□□□ -2.16
NPAS2Q99743 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
NPAS2Q99743 WWP1P1-201ENST00000466609 2769 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 RNU6-623P-201ENST00000363143 105 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 RNU6-483P-201ENST00000384088 108 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 RNU6-648P-201ENST00000410190 107 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 RNU6-1068P-201ENST00000410958 103 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.56□□□□□ -2.16
NPAS2Q99743 AL133396.1-201ENST00000432048 687 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.56□□□□□ -2.16
NPAS2Q99743 FAM206BP-201ENST00000510179 541 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 RNU6-1053P-201ENST00000515930 101 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 RNU6-506P-201ENST00000516553 94 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 RNU6-314P-201ENST00000516574 104 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 SNORA31.16-201ENST00000516773 139 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.56□□□□□ -2.16
NPAS2Q99743 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.56□□□□□ -2.16
NPAS2Q99743 HSPE1P4-201ENST00000550617 308 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.56□□□□□ -2.16
NPAS2Q99743 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.56□□□□□ -2.16
NPAS2Q99743 SUB1P4-201ENST00000566062 339 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 MIR3923-201ENST00000579521 83 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 AC092747.3-201ENST00000603769 301 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 AC012557.2-201ENST00000605919 418 ntBASIC1.56□□□□□ -2.16
NPAS2Q99743 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
NPAS2Q99743 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NPAS2Q99743 RNU6-1090P-201ENST00000364065 94 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 RNU4-42P-201ENST00000364738 142 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 RNU6-338P-201ENST00000383888 105 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 Y_RNA.481-201ENST00000384373 102 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 SNORD116-4-201ENST00000384733 96 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 RN7SKP101-201ENST00000411376 320 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.55□□□□□ -2.16
NPAS2Q99743 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.55□□□□□ -2.16
NPAS2Q99743 MTND3P16-201ENST00000452205 344 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 AC130509.1-201ENST00000464158 433 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.55□□□□□ -2.16
NPAS2Q99743 AC016632.1-201ENST00000503994 196 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 RPL39P5-202ENST00000512505 151 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 SNORA14.1-201ENST00000516113 141 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 RNU6-189P-201ENST00000516120 101 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 RNU6-1281P-201ENST00000516223 105 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 AC069113.1-201ENST00000517763 267 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 CENPUP1-201ENST00000526649 1202 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 HMGB1P33-201ENST00000563485 527 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 MIR4303-201ENST00000581299 66 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 AL121757.2-201ENST00000611223 313 ntBASIC1.55□□□□□ -2.16
NPAS2Q99743 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.54□□□□□ -2.16
NPAS2Q99743 MIR424-201ENST00000362227 98 ntBASIC1.54□□□□□ -2.16
NPAS2Q99743 Y_RNA.3-201ENST00000362331 103 ntBASIC1.54□□□□□ -2.16
NPAS2Q99743 U8.10-201ENST00000384260 133 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms