Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 MTATP6P17-201ENST00000431030 672 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 TPT1P7-201ENST00000458300 517 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 AC016925.1-201ENST00000458303 298 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 FAM206BP-201ENST00000510179 541 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 SUMO2P18-201ENST00000518873 252 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 CENPUP1-201ENST00000526649 1202 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC43Q96MW1 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC43Q96MW1 MIR4769-201ENST00000584126 77 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 AC092747.3-201ENST00000603769 301 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 AC017083.3-201ENST00000609955 700 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 AC083806.3-201ENST00000614016 455 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 AC103705.1-201ENST00000619013 241 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 AL136221.1-201ENST00000621449 509 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.79□□□□□ -2.12
CCDC43Q96MW1 MTND5P9-201ENST00000503854 1755 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 ZNF72P-201ENST00000425869 1908 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 AL159152.1-201ENST00000635019 2587 ntBASIC1.79□□□□□ -2.12
CCDC43Q96MW1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
CCDC43Q96MW1 RNU6-227P-201ENST00000362865 103 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 RNU4-42P-201ENST00000364738 142 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 RNU4-66P-201ENST00000365199 138 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC43Q96MW1 MTND3P9-201ENST00000429526 346 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 MTCO1P44-201ENST00000441935 243 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 RPL9P9-202ENST00000466501 579 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC005908.1-201ENST00000468701 347 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC096745.1-201ENST00000509945 370 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC025465.4-201ENST00000513422 638 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC087854.1-201ENST00000519706 414 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC104576.1-201ENST00000524225 88 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC025423.5-201ENST00000550230 219 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AL118558.2-201ENST00000556294 238 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 RPL17P51-201ENST00000605218 238 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 MIR8074-201ENST00000615081 81 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.78□□□□□ -2.12
CCDC43Q96MW1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.78□□□□□ -2.12
CCDC43Q96MW1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
CCDC43Q96MW1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 RNU6-82P-201ENST00000363970 107 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 Y_RNA.378-201ENST00000365652 113 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 SNORA18.2-201ENST00000383865 132 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 RNU6-38P-201ENST00000384085 107 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 RPS20P15-201ENST00000412792 311 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AL358453.1-201ENST00000422522 250 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 HMGB1P18-201ENST00000438801 619 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AC007395.1-201ENST00000451333 677 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 RPS29P27-201ENST00000463711 170 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 RNU6-1069P-201ENST00000516612 133 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AP003034.1-201ENST00000534621 422 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 SNORA59B-202ENST00000578183 701 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AL357078.3-201ENST00000607528 618 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AL121757.2-201ENST00000611223 313 ntBASIC1.77□□□□□ -2.13
CCDC43Q96MW1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC43Q96MW1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC43Q96MW1 Y_RNA.132-201ENST00000363421 102 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 RNU6-338P-201ENST00000383888 105 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 RNU6-296P-201ENST00000384608 107 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC43Q96MW1 AC010531.2-201ENST00000465012 153 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 AC087477.1-201ENST00000465747 340 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 Y_RNA.688-201ENST00000516565 95 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 AC104383.1-201ENST00000530297 370 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC43Q96MW1 MTND1P15-201ENST00000579262 949 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 AP001330.5-201ENST00000607176 411 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 AC022079.1-201ENST00000621546 602 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 AC068205.3-201ENST00000636385 468 ntBASIC1.76□□□□□ -2.13
CCDC43Q96MW1 RNU6-545P-201ENST00000362681 104 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 RNU6-1329P-201ENST00000365664 107 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 SNORA69-201ENST00000383895 132 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 SNORA29-201ENST00000384183 140 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 RNA5SP213-201ENST00000391031 106 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 SNORA67.5-201ENST00000391036 107 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC43Q96MW1 USP9YP28-201ENST00000435142 589 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 AC099677.2-201ENST00000436385 175 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 AC112492.4-201ENST00000456549 352 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 AC091435.1-201ENST00000505442 584 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.75□□□□□ -2.13
CCDC43Q96MW1 HMGB1P33-201ENST00000563485 527 ntBASIC1.75□□□□□ -2.13
CCDC43Q96MW1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms