Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RN7SKP61-201ENST00000410642 295 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 RPS26P42-201ENST00000413485 326 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.53□□□□□ -1.84
EPHB3P54753 IFNA11P-201ENST00000446352 526 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.53□□□□□ -1.84
EPHB3P54753 RPL23AP67-201ENST00000465341 474 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 RPS27AP9-201ENST00000477681 438 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 RPS4XP22-201ENST00000480755 780 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.53□□□□□ -1.84
EPHB3P54753 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.53□□□□□ -1.84
EPHB3P54753 RNU6-426P-201ENST00000516464 97 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 SNORD116-25-201ENST00000516517 92 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 RNA5SP54-201ENST00000516951 92 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 CYCSP23-201ENST00000519781 313 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 AC010999.1-201ENST00000611856 324 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 AC068831.7-201ENST00000616954 363 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.53□□□□□ -1.84
EPHB3P54753 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
EPHB3P54753 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.53□□□□□ -1.84
EPHB3P54753 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.85
EPHB3P54753 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
EPHB3P54753 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
EPHB3P54753 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
EPHB3P54753 RNU6-778P-201ENST00000363269 103 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 RNU5F-3P-201ENST00000363767 117 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 RNU6-873P-201ENST00000363833 107 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 RNA5SP205-201ENST00000364653 136 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 SNORA48.2-201ENST00000390926 124 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 NDUFB4P4-201ENST00000404822 243 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 RNU6-257P-201ENST00000410238 98 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.52□□□□□ -1.85
EPHB3P54753 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.52□□□□□ -1.85
EPHB3P54753 AC112220.1-201ENST00000434628 355 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 AC010095.1-201ENST00000443543 144 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 AC115115.1-201ENST00000449927 248 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 AC010409.1-201ENST00000487382 476 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 AC016632.1-201ENST00000503994 196 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.52□□□□□ -1.85
EPHB3P54753 PHBP14-201ENST00000512887 367 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 RNU1-103P-201ENST00000516502 125 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 RNU6-1231P-201ENST00000517185 103 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.52□□□□□ -1.85
EPHB3P54753 CR383656.8-201ENST00000549046 145 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.52□□□□□ -1.85
EPHB3P54753 AC019159.1-201ENST00000605094 187 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 MIR6134-201ENST00000617606 109 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 Y_RNA.778-201ENST00000620203 90 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 AC022149.2-201ENST00000621061 203 ntBASIC3.52□□□□□ -1.85
EPHB3P54753 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.52□□□□□ -1.85
EPHB3P54753 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.52□□□□□ -1.85
EPHB3P54753 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
EPHB3P54753 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.52□□□□□ -1.85
EPHB3P54753 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
EPHB3P54753 SNORA72.2-201ENST00000365028 127 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 RNU1-140P-201ENST00000365040 165 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 RNU6-215P-201ENST00000365169 102 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 RNU1-100P-201ENST00000365255 165 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 Y_RNA.357-201ENST00000365487 109 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 RNU4-17P-201ENST00000365598 141 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 MIR186-201ENST00000384988 86 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 AL357075.1-201ENST00000404107 726 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 RNU2-2P-201ENST00000410396 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 RNU4-47P-201ENST00000410876 114 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 RPL26P27-201ENST00000414397 437 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 AC074117.2-201ENST00000417130 397 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 AC138623.1-201ENST00000418060 216 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 SEPT7P4-201ENST00000437076 306 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 GPM6BP3-201ENST00000442797 145 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 Z75741.1-201ENST00000446793 314 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.51□□□□□ -1.85
EPHB3P54753 RN7SL504P-201ENST00000494496 287 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 HSPE1P4-201ENST00000550617 308 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 AC020895.1-201ENST00000595362 272 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 RNU2-4P-201ENST00000606190 192 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 FTX_3.1-201ENST00000610451 147 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.15-201ENST00000611544 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.16-201ENST00000613119 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.12-201ENST00000613778 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.9-201ENST00000615427 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.11-201ENST00000616345 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.2-201ENST00000616535 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.3-201ENST00000617785 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.19-201ENST00000618602 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 RNU2-1-201ENST00000618664 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.6-201ENST00000619225 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.5-201ENST00000619465 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 U2.10-201ENST00000620268 191 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 AC092628.2-201ENST00000622492 339 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.51□□□□□ -1.85
EPHB3P54753 AC092593.1-201ENST00000515413 1815 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
EPHB3P54753 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
EPHB3P54753 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
EPHB3P54753 SRP72P2-201ENST00000344851 1979 ntBASIC3.51□□□□□ -1.85
EPHB3P54753 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.5□□□□□ -1.85
EPHB3P54753 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.5□□□□□ -1.85
EPHB3P54753 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
EPHB3P54753 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms