Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC078809.1-201ENST00000427601 140 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.31□□□□□ -2.2
SCN4AP35499 Z83846.1-201ENST00000446798 265 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.31□□□□□ -2.2
SCN4AP35499 CYP2C59P-201ENST00000457790 269 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.31□□□□□ -2.2
SCN4AP35499 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.31□□□□□ -2.2
SCN4AP35499 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.31□□□□□ -2.2
SCN4AP35499 AC104383.1-201ENST00000530297 370 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.31□□□□□ -2.2
SCN4AP35499 AC025678.1-201ENST00000567861 338 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 MIR3136-201ENST00000583498 78 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AC025165.5-201ENST00000602802 578 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AL360085.1-201ENST00000604713 532 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AC018889.1-201ENST00000605372 397 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AC108706.1-201ENST00000611053 297 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 HULC.1-201ENST00000612720 240 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 AL132822.1-201ENST00000617063 513 ntBASIC1.31□□□□□ -2.2
SCN4AP35499 ZNF680P1-201ENST00000436625 1469 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SCN4AP35499 AC091812.1-201ENST00000432235 1948 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 RNU4-38P-201ENST00000364472 129 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 RNU6-160P-201ENST00000384591 107 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 Y_RNA.553-201ENST00000384670 102 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 MIR29B2-201ENST00000385055 81 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 DEFB108C-201ENST00000400154 252 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.3□□□□□ -2.2
SCN4AP35499 RNA5SP201-201ENST00000410316 124 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 EBAG9P1-201ENST00000418955 543 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 AC244670.1-201ENST00000436879 112 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 MTCO1P19-201ENST00000443487 500 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 RNU6-1037P-201ENST00000459571 107 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.3□□□□□ -2.2
SCN4AP35499 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.3□□□□□ -2.2
SCN4AP35499 RN7SKP298-201ENST00000515950 94 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 AC026371.1-201ENST00000551867 419 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 AC090517.1-201ENST00000569307 266 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 NDUFA8P1-201ENST00000605525 367 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 AC073114.1-201ENST00000612027 490 ntBASIC1.3□□□□□ -2.2
SCN4AP35499 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SCN4AP35499 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SCN4AP35499 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SCN4AP35499 Y_RNA.41-201ENST00000362646 102 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 Y_RNA.178-201ENST00000363832 102 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 MTCYBP8-201ENST00000422855 651 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 RPL23AP95-201ENST00000426806 265 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 SDAD1P3-201ENST00000427380 333 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 SNAP23P1-201ENST00000433229 246 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SCN4AP35499 RNU7-63P-201ENST00000459054 62 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AC055731.1-201ENST00000474387 401 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.29□□□□□ -2.2
SCN4AP35499 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN4AP35499 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.29□□□□□ -2.2
SCN4AP35499 MTND2P38-201ENST00000522536 667 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AP003392.2-201ENST00000527269 208 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AP003034.1-201ENST00000534621 422 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.29□□□□□ -2.2
SCN4AP35499 IMMP1LP2-201ENST00000552954 492 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AC090115.3-201ENST00000553218 849 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AL157687.1-201ENST00000554853 619 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.29□□□□□ -2.2
SCN4AP35499 AC008752.3-201ENST00000588113 712 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 BNIP3P16-201ENST00000589779 534 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AC073539.2-201ENST00000597113 165 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AL451064.1-201ENST00000607718 471 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
SCN4AP35499 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SCN4AP35499 RNU6-552P-201ENST00000362869 119 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 SNORA75-201ENST00000384158 137 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 RNU6-348P-201ENST00000384386 107 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 RNU6-692P-201ENST00000384496 107 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SCN4AP35499 RNU6-1158P-201ENST00000391167 107 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 MIR1262-201ENST00000408276 93 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 ARL5AP1-201ENST00000418991 388 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN4AP35499 PRELID3BP1-201ENST00000457142 540 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 RNU6-956P-201ENST00000458868 103 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN4AP35499 AC108078.1-201ENST00000508073 725 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AC107953.1-201ENST00000522216 297 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AC103996.1-201ENST00000555468 102 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 SUB1P2-201ENST00000556401 297 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 AC093788.1-201ENST00000609356 927 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 ZNF702P-202ENST00000434269 1966 ntBASIC1.29□□□□□ -2.2
SCN4AP35499 OR4G2P-201ENST00000328113 903 ntBASIC1.28□□□□□ -2.2
SCN4AP35499 RNU6-438P-201ENST00000365561 103 ntBASIC1.28□□□□□ -2.2
SCN4AP35499 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
SCN4AP35499 RNU6-378P-201ENST00000384324 107 ntBASIC1.28□□□□□ -2.2
SCN4AP35499 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
SCN4AP35499 MIR1283-2-201ENST00000408621 87 ntBASIC1.28□□□□□ -2.2
SCN4AP35499 AL663109.1-201ENST00000411498 844 ntBASIC1.28□□□□□ -2.2
SCN4AP35499 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN4AP35499 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.28□□□□□ -2.2
SCN4AP35499 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCN4AP35499 RPS23P5-201ENST00000495419 428 ntBASIC1.28□□□□□ -2.2
SCN4AP35499 Y_RNA.654-201ENST00000497848 106 ntBASIC1.28□□□□□ -2.2
SCN4AP35499 AC091885.1-201ENST00000506658 268 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 240.4 ms