Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 Y_RNA.5-201ENST00000362334 102 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 RNU6-308P-201ENST00000390957 107 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 RNU6-1156P-201ENST00000410365 100 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AIMP1P2-201ENST00000425294 312 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 IFNA11P-201ENST00000446352 526 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 snoU13.30-201ENST00000458951 104 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 HMGB1P35-201ENST00000503360 598 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AC105758.1-201ENST00000506038 399 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 SNORA31.16-201ENST00000516773 139 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 RNU6-988P-201ENST00000519081 107 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AC023442.1-201ENST00000531247 422 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AC015712.3-201ENST00000559380 164 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AC104581.2-201ENST00000572227 430 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 Z98751.3-201ENST00000604447 521 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AL034555.1-201ENST00000604816 211 ntBASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM43Q96BQ3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MIR148B-201ENST00000362252 99 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.202-201ENST00000364083 110 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.405-201ENST00000383979 100 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.451-201ENST00000384200 100 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.524-201ENST00000384564 100 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.561-201ENST00000384694 100 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 SNORA12.2-201ENST00000391040 156 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 AL590004.1-201ENST00000405321 300 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MIR1289-2-201ENST00000408360 111 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 RN7SKP192-201ENST00000411291 327 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 AC012306.1-201ENST00000423267 114 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 AC018865.2-201ENST00000423631 129 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 EIF4EP4-201ENST00000424916 578 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 AC008267.5-201ENST00000424928 265 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MTCO3P29-201ENST00000432119 779 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MICF-203ENST00000432679 129 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 AL603825.1-201ENST00000438481 80 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 AF186996.7-201ENST00000492781 209 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 SNORA64.4-201ENST00000516632 81 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.711-201ENST00000516993 102 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 COX6CP5-201ENST00000527162 228 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 AP003072.1-201ENST00000531740 145 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 AC007536.1-201ENST00000533382 349 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MIR3199-1-201ENST00000582434 88 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 RMST_6.1-201ENST00000611980 203 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MIR1244-1-201ENST00000612829 85 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MIR1244-3-201ENST00000635744 85 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MIR1244-2-201ENST00000636449 85 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MIR1244-4-202ENST00000636813 85 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 AL450472.1-202ENST00000637286 180 ntBASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM43Q96BQ3 SNORD115-32-201ENST00000364079 82 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 SNORD56.5-201ENST00000364281 72 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 SNORD114-30-201ENST00000364448 72 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 MIR32-201ENST00000384965 70 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 MIR218-1-201ENST00000384999 110 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 CBX3P9-201ENST00000402326 552 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 RNU4-53P-201ENST00000410828 140 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 MRPS18CP6-201ENST00000423587 223 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 AC112220.1-201ENST00000434628 355 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 Z82188.1-201ENST00000436709 154 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 AC146507.2-201ENST00000460608 476 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 AC073901.1-201ENST00000462471 408 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 AL163540.1-201ENST00000485382 386 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 SCARNA3-201ENST00000517097 143 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 RN7SKP295-201ENST00000517264 153 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 AC026241.1-201ENST00000517873 2142 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 IGKV3-31-201ENST00000523109 329 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 ELOCP31-201ENST00000540463 467 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 MIR3923-201ENST00000579521 83 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 ZNF861P-201ENST00000588126 639 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 RPL30P11-203ENST00000598995 310 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.812-201ENST00000610788 101 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.784-201ENST00000613803 101 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 AC083806.3-201ENST00000614016 455 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.787-201ENST00000616522 101 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.780-201ENST00000617336 101 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 Y_RNA.801-201ENST00000619005 101 ntBASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
TRIM43Q96BQ3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM43Q96BQ3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms