Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC093424.1-201ENST00000604999 338 ntBASIC1.43□□□□□ -2.18
LRRC40Q9H9A6 AC010615.1-201ENST00000594254 1764 ntBASIC1.43□□□□□ -2.18
LRRC40Q9H9A6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
LRRC40Q9H9A6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LRRC40Q9H9A6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RNU6-862P-201ENST00000362804 105 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RNU6-181P-201ENST00000363225 107 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 SNORD1A-201ENST00000364968 72 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RNY3P10-201ENST00000384764 102 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 MT-TH-201ENST00000387441 69 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RNU6-174P-201ENST00000410406 106 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RPL30P13-201ENST00000418873 348 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AL365203.2-201ENST00000423444 196 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 FTH1P12-201ENST00000432137 551 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AC099677.2-201ENST00000436385 175 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AC007395.1-201ENST00000451333 677 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AC016925.1-201ENST00000458303 298 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AC007547.1-201ENST00000462177 490 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RPS23P5-201ENST00000495419 428 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AC008628.2-201ENST00000502605 298 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RN7SKP287-201ENST00000516546 266 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RNU6-445P-201ENST00000516949 107 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AP002963.1-201ENST00000530590 184 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 MTND1P24-201ENST00000552175 861 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 SUB1P3-201ENST00000564581 315 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AGGF1P4-201ENST00000568249 801 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AC090517.1-201ENST00000569307 266 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 RPL17P51-201ENST00000605218 238 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AL360219.1-201ENST00000610230 366 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AC009161.2-201ENST00000624626 138 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 AL450472.1-202ENST00000637286 180 ntBASIC1.42□□□□□ -2.18
LRRC40Q9H9A6 SNORA36A-201ENST00000384221 132 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 MIR208B-201ENST00000401172 77 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 PIGFP2-201ENST00000421400 651 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 AL591806.2-201ENST00000433122 173 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 SNRPGP9-201ENST00000456025 225 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 snoU13.30-201ENST00000458951 104 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 AC099513.1-201ENST00000490423 301 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 AC079140.3-201ENST00000511111 550 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 AP005597.4-201ENST00000526762 229 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 AL160236.1-201ENST00000556317 195 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 MTCO3P23-201ENST00000561363 289 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 AL121890.5-201ENST00000620848 304 ntBASIC1.41□□□□□ -2.18
LRRC40Q9H9A6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 FGF7P2-201ENST00000332473 296 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 Y_RNA.132-201ENST00000363421 102 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 RNU6-606P-201ENST00000384721 111 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 RNU2-29P-201ENST00000410423 189 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 ARL5AP1-201ENST00000418991 388 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AL135790.2-201ENST00000437701 267 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AC010531.2-201ENST00000465012 153 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AL163973.1-201ENST00000484753 577 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 RNA5SP437-201ENST00000517249 129 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AP005136.1-201ENST00000579765 429 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 MIR3941-201ENST00000582572 103 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.4□□□□□ -2.19
LRRC40Q9H9A6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 RNU1-62P-201ENST00000362599 164 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 RNU1-76P-201ENST00000362903 159 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 RNU1-17P-201ENST00000363022 152 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 MIR548B-201ENST00000385247 97 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 RNU2-9P-201ENST00000410194 145 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 RNU6-248P-201ENST00000410720 107 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 MTCO1P21-201ENST00000416634 589 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 MTND2P18-201ENST00000419962 1030 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 AC245047.4-201ENST00000433189 144 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 AC079140.2-201ENST00000506193 142 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 AC060788.1-201ENST00000521318 469 ntBASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC40Q9H9A6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms