Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KRTAP3-1Q9BYR8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KRTAP3-1Q9BYR8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KRTAP3-1Q9BYR8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
KRTAP3-1Q9BYR8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 AC107068.1-201ENST00000563286 4218 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-349P-201ENST00000362402 107 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU1-133P-201ENST00000364867 167 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 MIR548O-201ENST00000408583 114 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 Y_RNA.593-201ENST00000410292 98 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-1186P-201ENST00000410429 97 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RN7SKP229-201ENST00000410465 302 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RN7SL303P-201ENST00000469773 251 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 AC097484.1-201ENST00000471148 389 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 NIP7P2-201ENST00000485801 544 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 COX6B1P5-201ENST00000509843 249 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RNA5SP446-201ENST00000515955 82 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-1291P-201ENST00000516591 104 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-965P-201ENST00000516721 96 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-856P-201ENST00000516959 98 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RN7SL176P-201ENST00000580352 264 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 SNORA74C-1-201ENST00000580726 201 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RN7SL52P-201ENST00000584271 284 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 AL160290.3-201ENST00000604869 165 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.44□□□□□ -2.02
KRTAP3-1Q9BYR8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 AC080128.1-201ENST00000474389 1917 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 MIR126-201ENST00000362291 85 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 Y_RNA.10-201ENST00000362371 110 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNA5SP388-201ENST00000362584 119 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNY3P2-201ENST00000362918 102 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNY1P10-201ENST00000363268 113 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNA5SP151-201ENST00000365632 117 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-1124P-201ENST00000384169 107 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 Y_RNA.466-201ENST00000384294 113 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 MT-TI-201ENST00000387365 69 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-816P-201ENST00000390914 107 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-1268P-201ENST00000391214 107 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU6-1239P-201ENST00000391310 107 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RN7SKP167-201ENST00000411047 285 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 Z74021.1-201ENST00000423610 407 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU7-123P-201ENST00000515911 60 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 RNU7-99P-201ENST00000516271 62 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 AL358944.1-201ENST00000528537 144 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 SNORD95-201ENST00000579879 68 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 MIR3614-201ENST00000581261 86 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 AC006116.3-201ENST00000592968 361 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 CR392039.5-201ENST00000623201 510 ntBASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KRTAP3-1Q9BYR8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms