Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL031659.1-201ENST00000447075 539 ntBASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 MTND1P17-201ENST00000448961 204 ntBASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 snoU13.14-201ENST00000459372 104 ntBASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 AC116337.1-201ENST00000509680 687 ntBASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 RNA5SP458-201ENST00000516188 119 ntBASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 AC105029.1-201ENST00000520250 669 ntBASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 AC005668.1-201ENST00000571142 476 ntBASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 MIR6128-201ENST00000615528 109 ntBASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LYSMD4Q5XG99 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 Y_RNA.356-201ENST00000365475 113 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 RNU6-128P-201ENST00000383976 107 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 MIR221-201ENST00000385135 110 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 AIMP1P2-201ENST00000425294 312 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 RPS3AP52-201ENST00000435639 297 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 AL139109.1-201ENST00000455491 297 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 CYP2C59P-201ENST00000457790 269 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 RNU6-1037P-201ENST00000459571 107 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 RPS27P27-201ENST00000498779 255 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 PTP4A1P4-201ENST00000512479 322 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 RNU1-104P-201ENST00000517280 175 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 AC093249.1-201ENST00000567049 203 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 RPS3AP23-202ENST00000574601 686 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 POLR3GP2-201ENST00000588366 668 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 AL355297.2-201ENST00000604792 129 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 MIR219B-201ENST00000637023 88 ntBASIC2.24□□□□□ -2.05
LYSMD4Q5XG99 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 RNA5SP240-201ENST00000365355 128 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 RNU6-1032P-201ENST00000384100 107 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 RNU6-43P-201ENST00000384302 107 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 Y_RNA.474-201ENST00000384341 102 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 MIR517A-201ENST00000385001 87 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 AL161788.1-201ENST00000441805 169 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 RPS29P27-201ENST00000463711 170 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 RNU6-277P-201ENST00000516272 106 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 RNU6-612P-201ENST00000516909 102 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 RAB11AP2-201ENST00000545905 639 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 AC093027.1-201ENST00000546698 429 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 uc_338.5-201ENST00000611839 155 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 AL161423.1-201ENST00000613700 262 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.23□□□□□ -2.05
LYSMD4Q5XG99 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 AL356292.1-201ENST00000283110 373 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 SNORA67.1-201ENST00000364749 141 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 RNU6-1009P-201ENST00000390996 107 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 CBX3P9-201ENST00000402326 552 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 RN7SKP158-201ENST00000410453 326 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 USP9YP30-201ENST00000430729 455 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 HMGN2P23-201ENST00000456759 269 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 RPL30P1-201ENST00000488676 339 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 Y_RNA.676-201ENST00000516393 96 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 Y_RNA.691-201ENST00000516611 103 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 RNU6-1213P-201ENST00000517075 94 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 AC115990.1-201ENST00000526957 301 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 CPDP1-201ENST00000579660 283 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 AL670379.2-201ENST00000604983 252 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 AC016727.1-205ENST00000605437 569 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 AL132765.2-201ENST00000610812 351 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 AC090517.3-201ENST00000625170 141 ntBASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LYSMD4Q5XG99 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
LYSMD4Q5XG99 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
LYSMD4Q5XG99 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LYSMD4Q5XG99 Y_RNA.58-201ENST00000362807 102 ntBASIC2.21□□□□□ -2.06
LYSMD4Q5XG99 RNU6-1285P-201ENST00000363480 105 ntBASIC2.21□□□□□ -2.06
LYSMD4Q5XG99 Y_RNA.154-201ENST00000363624 102 ntBASIC2.21□□□□□ -2.06
LYSMD4Q5XG99 RNU6-1141P-201ENST00000364520 107 ntBASIC2.21□□□□□ -2.06
LYSMD4Q5XG99 RNY3P1-201ENST00000365085 102 ntBASIC2.21□□□□□ -2.06
LYSMD4Q5XG99 RNY3-201ENST00000365484 102 ntBASIC2.21□□□□□ -2.06
LYSMD4Q5XG99 SNORA67.3-201ENST00000384366 140 ntBASIC2.21□□□□□ -2.06
LYSMD4Q5XG99 Y_RNA.490-201ENST00000384413 102 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms