Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 AC136932.1-201ENST00000574771 208 ntBASIC3.4□□□□□ -1.87
KLF4O43474 MIR4738-201ENST00000579134 87 ntBASIC3.4□□□□□ -1.87
KLF4O43474 AC073657.2-201ENST00000605661 303 ntBASIC3.4□□□□□ -1.87
KLF4O43474 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.4□□□□□ -1.87
KLF4O43474 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.4□□□□□ -1.87
KLF4O43474 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KLF4O43474 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
KLF4O43474 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.4□□□□□ -1.87
KLF4O43474 HSPA8P1-201ENST00000425843 1833 ntBASIC3.4□□□□□ -1.87
KLF4O43474 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.39□□□□□ -1.87
KLF4O43474 CEP170P1-201ENST00000502249 4587 ntBASIC3.39□□□□□ -1.87
KLF4O43474 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KLF4O43474 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KLF4O43474 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KLF4O43474 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KLF4O43474 Y_RNA.26-201ENST00000362539 101 ntBASIC3.39□□□□□ -1.87
KLF4O43474 SNORD81.1-201ENST00000363064 77 ntBASIC3.39□□□□□ -1.87
KLF4O43474 SNORD113-8-201ENST00000363497 74 ntBASIC3.39□□□□□ -1.87
KLF4O43474 Y_RNA.396-201ENST00000383949 103 ntBASIC3.39□□□□□ -1.87
KLF4O43474 RNU6-505P-201ENST00000384427 107 ntBASIC3.39□□□□□ -1.87
KLF4O43474 MIR449B-201ENST00000384995 97 ntBASIC3.39□□□□□ -1.87
KLF4O43474 RNA5SP424-201ENST00000390988 115 ntBASIC3.39□□□□□ -1.87
KLF4O43474 Z98941.1-201ENST00000407764 100 ntBASIC3.39□□□□□ -1.87
KLF4O43474 RNU2-20P-201ENST00000410425 191 ntBASIC3.39□□□□□ -1.87
KLF4O43474 RPL23AP36-201ENST00000413895 458 ntBASIC3.39□□□□□ -1.87
KLF4O43474 EEF1B2P7-201ENST00000451177 676 ntBASIC3.39□□□□□ -1.87
KLF4O43474 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.39□□□□□ -1.87
KLF4O43474 RNA5SP164-201ENST00000516533 110 ntBASIC3.39□□□□□ -1.87
KLF4O43474 RNU1-117P-201ENST00000517041 158 ntBASIC3.39□□□□□ -1.87
KLF4O43474 AP006245.1-201ENST00000522549 120 ntBASIC3.39□□□□□ -1.87
KLF4O43474 AC018630.3-201ENST00000542637 96 ntBASIC3.39□□□□□ -1.87
KLF4O43474 TGIF1P1-201ENST00000558095 802 ntBASIC3.39□□□□□ -1.87
KLF4O43474 AC110588.1-201ENST00000559699 137 ntBASIC3.39□□□□□ -1.87
KLF4O43474 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.39□□□□□ -1.87
KLF4O43474 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KLF4O43474 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.38□□□□□ -1.87
KLF4O43474 AC093010.3-201ENST00000570269 15214 ntBASIC3.38□□□□□ -1.87
KLF4O43474 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
KLF4O43474 RNU4-90P-201ENST00000362773 141 ntBASIC3.38□□□□□ -1.87
KLF4O43474 RNU1-72P-201ENST00000362976 153 ntBASIC3.38□□□□□ -1.87
KLF4O43474 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
KLF4O43474 MT-TG-201ENST00000387429 68 ntBASIC3.38□□□□□ -1.87
KLF4O43474 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
KLF4O43474 MIR300-201ENST00000401138 83 ntBASIC3.38□□□□□ -1.87
KLF4O43474 RNU6-121P-201ENST00000410525 99 ntBASIC3.38□□□□□ -1.87
KLF4O43474 Y_RNA.602-201ENST00000410535 92 ntBASIC3.38□□□□□ -1.87
KLF4O43474 RN7SKP220-201ENST00000410611 288 ntBASIC3.38□□□□□ -1.87
KLF4O43474 RNU2-25P-201ENST00000411041 191 ntBASIC3.38□□□□□ -1.87
KLF4O43474 RPL21P38-201ENST00000418090 167 ntBASIC3.38□□□□□ -1.87
KLF4O43474 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
KLF4O43474 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.38□□□□□ -1.87
KLF4O43474 AC090515.1-201ENST00000465295 476 ntBASIC3.38□□□□□ -1.87
KLF4O43474 RN7SL283P-201ENST00000489055 303 ntBASIC3.38□□□□□ -1.87
KLF4O43474 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.38□□□□□ -1.87
KLF4O43474 RNU1-95P-201ENST00000516357 160 ntBASIC3.38□□□□□ -1.87
KLF4O43474 RNU1-128P-201ENST00000516704 160 ntBASIC3.38□□□□□ -1.87
KLF4O43474 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.38□□□□□ -1.87
KLF4O43474 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
KLF4O43474 AC087499.8-201ENST00000578406 226 ntBASIC3.38□□□□□ -1.87
KLF4O43474 AC008739.3-201ENST00000603262 127 ntBASIC3.38□□□□□ -1.87
KLF4O43474 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.38□□□□□ -1.87
KLF4O43474 AC037487.3-201ENST00000606668 112 ntBASIC3.38□□□□□ -1.87
KLF4O43474 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
KLF4O43474 AL357075.2-201ENST00000614906 189 ntBASIC3.38□□□□□ -1.87
KLF4O43474 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.38□□□□□ -1.87
KLF4O43474 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.38□□□□□ -1.87
KLF4O43474 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
KLF4O43474 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KLF4O43474 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.38□□□□□ -1.87
KLF4O43474 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KLF4O43474 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
KLF4O43474 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KLF4O43474 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.37□□□□□ -1.87
KLF4O43474 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.37□□□□□ -1.87
KLF4O43474 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
KLF4O43474 Y_RNA.105-201ENST00000363182 111 ntBASIC3.37□□□□□ -1.87
KLF4O43474 RNU6-961P-201ENST00000363893 105 ntBASIC3.37□□□□□ -1.87
KLF4O43474 RNA5SP42-201ENST00000364278 115 ntBASIC3.37□□□□□ -1.87
KLF4O43474 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.37□□□□□ -1.87
KLF4O43474 RNU6-546P-201ENST00000383991 107 ntBASIC3.37□□□□□ -1.87
KLF4O43474 Y_RNA.476-201ENST00000384347 108 ntBASIC3.37□□□□□ -1.87
KLF4O43474 Y_RNA.581-201ENST00000391017 97 ntBASIC3.37□□□□□ -1.87
KLF4O43474 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KLF4O43474 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.37□□□□□ -1.87
KLF4O43474 snoU13.22-201ENST00000459428 104 ntBASIC3.37□□□□□ -1.87
KLF4O43474 AC098869.1-201ENST00000481627 292 ntBASIC3.37□□□□□ -1.87
KLF4O43474 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.37□□□□□ -1.87
KLF4O43474 AC026784.1-201ENST00000507986 352 ntBASIC3.37□□□□□ -1.87
KLF4O43474 RNU6-1271P-201ENST00000517049 105 ntBASIC3.37□□□□□ -1.87
KLF4O43474 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.37□□□□□ -1.87
KLF4O43474 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.37□□□□□ -1.87
KLF4O43474 MIR3117-201ENST00000584034 78 ntBASIC3.37□□□□□ -1.87
KLF4O43474 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.37□□□□□ -1.87
KLF4O43474 AL356280.1-201ENST00000603614 379 ntBASIC3.37□□□□□ -1.87
KLF4O43474 AL355297.2-201ENST00000604792 129 ntBASIC3.37□□□□□ -1.87
KLF4O43474 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
KLF4O43474 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
KLF4O43474 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KLF4O43474 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KLF4O43474 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms