Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-611P-201ENST00000384276 104 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 RPL21P75-201ENST00000396599 483 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 RPL21P28-201ENST00000401418 483 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 MTCYBP2-201ENST00000407745 171 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.43□□□□□ -1.86
KRT40Q6A162 EEF1A1P41-201ENST00000414667 207 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 AL590556.1-201ENST00000423231 483 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 RPL37P4-201ENST00000448908 268 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KRT40Q6A162 AL513124.1-201ENST00000450410 614 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 RPL21P39-201ENST00000463605 483 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 AP002884.2-201ENST00000471647 395 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 AC087190.1-201ENST00000484462 480 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 AC107032.1-201ENST00000485945 480 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 AC132942.1-201ENST00000486753 483 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 RPL30P1-201ENST00000488676 339 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 AC093591.1-201ENST00000491435 481 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 RPL21P16-201ENST00000495531 483 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.43□□□□□ -1.86
KRT40Q6A162 RNU6-1143P-201ENST00000516125 104 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 MIR4319-201ENST00000577285 85 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 RPL23AP78-201ENST00000599928 470 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 RPS29P30-201ENST00000600975 111 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
KRT40Q6A162 AC078938.1-201ENST00000620993 318 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 AC130454.1-201ENST00000622948 401 ntBASIC3.43□□□□□ -1.86
KRT40Q6A162 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KRT40Q6A162 AC090740.1-201ENST00000623193 2262 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRT40Q6A162 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
KRT40Q6A162 Y_RNA.27-201ENST00000362540 103 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 SNORA71.1-201ENST00000364523 117 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 SNORD32A-201ENST00000364805 84 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 RNU6-1035P-201ENST00000384477 107 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 RNU6-847P-201ENST00000411115 108 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.42□□□□□ -1.86
KRT40Q6A162 TOMM22P6-201ENST00000465035 409 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 RPL23AP49-201ENST00000492925 468 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.42□□□□□ -1.86
KRT40Q6A162 AC067942.3-201ENST00000512025 362 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 SNORA40.15-201ENST00000516884 107 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.42□□□□□ -1.86
KRT40Q6A162 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.42□□□□□ -1.86
KRT40Q6A162 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.42□□□□□ -1.86
KRT40Q6A162 AL442163.3-201ENST00000554110 156 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 AC107294.3-201ENST00000609211 526 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.42□□□□□ -1.86
KRT40Q6A162 U6.92-201ENST00000636464 89 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.42□□□□□ -1.86
KRT40Q6A162 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRT40Q6A162 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.42□□□□□ -1.86
KRT40Q6A162 Z75746.1-201ENST00000440243 2080 ntBASIC3.42□□□□□ -1.86
KRT40Q6A162 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
KRT40Q6A162 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KRT40Q6A162 AC009541.1-201ENST00000438279 2662 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.41□□□□□ -1.86
KRT40Q6A162 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
KRT40Q6A162 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.41□□□□□ -1.86
KRT40Q6A162 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRT40Q6A162 RNA5SP295-201ENST00000362655 121 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 RNU1-76P-201ENST00000362903 159 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 RNU6-527P-201ENST00000363425 104 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 Y_RNA.350-201ENST00000365409 98 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 Y_RNA.562-201ENST00000384695 113 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 BTF3L4P2-201ENST00000392798 346 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 MIR1302-6-201ENST00000408466 90 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 AC099548.1-201ENST00000421443 426 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.41□□□□□ -1.86
KRT40Q6A162 AC007969.2-201ENST00000441891 191 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.41□□□□□ -1.86
KRT40Q6A162 AC098869.1-201ENST00000481627 292 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 RN7SKP272-201ENST00000516988 232 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 AP003733.2-201ENST00000529409 171 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 AC010186.2-204ENST00000537668 439 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 AP002770.2-201ENST00000543613 532 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.41□□□□□ -1.86
KRT40Q6A162 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.41□□□□□ -1.86
KRT40Q6A162 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 SNORA43.4-201ENST00000629559 138 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 AC243829.7-201ENST00000633081 225 ntBASIC3.41□□□□□ -1.86
KRT40Q6A162 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRT40Q6A162 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
KRT40Q6A162 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
KRT40Q6A162 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
KRT40Q6A162 OR56A5-201ENST00000340110 738 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 Y_RNA.14-201ENST00000362415 103 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 RNU6-222P-201ENST00000362438 107 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 Y_RNA.60-201ENST00000362831 98 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 Y_RNA.183-201ENST00000363882 113 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 Y_RNA.257-201ENST00000364596 102 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 SNORD116-20-201ENST00000384529 92 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
KRT40Q6A162 FTH1P15-201ENST00000406984 280 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.4□□□□□ -1.87
KRT40Q6A162 AL139132.1-201ENST00000431587 344 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 AL135938.1-201ENST00000443141 297 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.4□□□□□ -1.87
KRT40Q6A162 RNU7-87P-201ENST00000459343 62 ntBASIC3.4□□□□□ -1.87
KRT40Q6A162 AP004217.1-201ENST00000480579 346 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms