Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN4AP35499 SNRPEP10-201ENST00000420249 274 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 RPS15AP10-201ENST00000432472 382 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 AC002486.1-201ENST00000435098 391 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 DYNLL1P5-201ENST00000467158 270 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 RNU2-19P-201ENST00000517288 84 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.39□□□□□ -2.19
SCN4AP35499 OSBPL9P5-201ENST00000542581 171 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN4AP35499 MIR3941-201ENST00000582572 103 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 AC008536.2-201ENST00000607284 349 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 AC092656.1-203ENST00000624134 423 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 AL157786.1-207ENST00000627771 695 ntBASIC1.39□□□□□ -2.19
SCN4AP35499 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SCN4AP35499 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SCN4AP35499 snoU2_19.1-201ENST00000362361 80 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU4-21P-201ENST00000362802 126 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-944P-201ENST00000364023 107 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 Y_RNA.201-201ENST00000364052 96 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 SNORA62.1-201ENST00000364287 154 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-297P-201ENST00000384636 107 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SCN4AP35499 AL591034.2-201ENST00000402839 359 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU2-9P-201ENST00000410194 145 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU2-29P-201ENST00000410423 189 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-1245P-201ENST00000411130 106 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 MTATP6P18-201ENST00000417994 673 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 MTCO3P46-201ENST00000425787 232 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AL591043.1-201ENST00000432461 424 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AL360271.2-201ENST00000447710 161 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AL162395.1-201ENST00000457882 422 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN4AP35499 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN4AP35499 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-685P-201ENST00000517088 95 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RN7SKP256-201ENST00000517201 314 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.38□□□□□ -2.19
SCN4AP35499 MTND4P7-201ENST00000523876 130 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AP001893.2-201ENST00000526949 202 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AC023050.3-201ENST00000541142 333 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 SUB1P4-201ENST00000566062 339 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AC109446.1-201ENST00000566172 220 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 U4atac.1-201ENST00000618345 95 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 Z69720.2-201ENST00000624755 279 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-105P-201ENST00000363909 104 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-487P-201ENST00000365430 104 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-74P-201ENST00000384235 107 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-606P-201ENST00000384721 111 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-550P-201ENST00000391057 101 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU2-48P-201ENST00000410694 191 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RN7SKP142-201ENST00000411236 328 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 OR9R1P-201ENST00000412200 877 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN4AP35499 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SCN4AP35499 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN4AP35499 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN4AP35499 AL161651.1-201ENST00000440882 223 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RPS29P15-201ENST00000458329 171 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 SCARNA18-201ENST00000459004 134 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 COPS8P3-201ENST00000526024 482 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AP005597.4-201ENST00000526762 229 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AC093249.1-201ENST00000567049 203 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 MIR3126-201ENST00000577443 74 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 BNIP3P30-201ENST00000601184 574 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RMST_4.1-201ENST00000616886 107 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 AC008133.2-201ENST00000624540 351 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN4AP35499 U4.7-201ENST00000638126 106 ntBASIC1.38□□□□□ -2.19
SCN4AP35499 RNU6-428P-201ENST00000362942 107 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 AL590002.1-201ENST00000406554 418 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 CYCSP33-201ENST00000414485 327 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN4AP35499 AL445305.1-201ENST00000432577 575 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.37□□□□□ -2.19
SCN4AP35499 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN4AP35499 AL353752.1-201ENST00000454946 260 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 AP001324.2-201ENST00000461163 319 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 AC096745.1-201ENST00000509945 370 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SCN4AP35499 RNU6-123P-201ENST00000516163 102 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 RNU6-1178P-201ENST00000516674 107 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 Y_RNA.695-201ENST00000516715 107 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN4AP35499 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN4AP35499 RPL30P11-203ENST00000598995 310 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.37□□□□□ -2.19
SCN4AP35499 AC112191.3-201ENST00000604371 277 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 AC123912.5-201ENST00000605470 343 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 RN7SKP299-201ENST00000606679 301 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 Z82243.1-201ENST00000609432 473 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 AC004223.4-201ENST00000612426 332 ntBASIC1.37□□□□□ -2.19
SCN4AP35499 Y_RNA.30-201ENST00000362572 97 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 U3.13-201ENST00000364804 214 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 SNORD115-7-201ENST00000365306 82 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RNU6-1127P-201ENST00000384580 107 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 MIR625-201ENST00000385047 85 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 BTF3L4P2-201ENST00000392798 346 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 RNU6-248P-201ENST00000410720 107 ntBASIC1.36□□□□□ -2.19
SCN4AP35499 CYCSP48-201ENST00000417124 323 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms