Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RNU6-1210P-201ENST00000363775 107 ntBASIC3.28□□□□□ -1.88
PTX3P26022 RNU1-57P-201ENST00000384491 166 ntBASIC3.28□□□□□ -1.88
PTX3P26022 MIR218-2-201ENST00000385006 110 ntBASIC3.28□□□□□ -1.88
PTX3P26022 MIR320B2-201ENST00000408479 138 ntBASIC3.28□□□□□ -1.88
PTX3P26022 SNORD12B-201ENST00000410433 91 ntBASIC3.28□□□□□ -1.88
PTX3P26022 RNU6-847P-201ENST00000411115 108 ntBASIC3.28□□□□□ -1.88
PTX3P26022 HMGN2P31-201ENST00000432430 273 ntBASIC3.28□□□□□ -1.88
PTX3P26022 AC112220.1-201ENST00000434628 355 ntBASIC3.28□□□□□ -1.88
PTX3P26022 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.28□□□□□ -1.88
PTX3P26022 AC009969.1-201ENST00000438726 172 ntBASIC3.28□□□□□ -1.88
PTX3P26022 AL358232.1-201ENST00000448030 501 ntBASIC3.28□□□□□ -1.88
PTX3P26022 CENPBD1P1-201ENST00000464061 469 ntBASIC3.28□□□□□ -1.88
PTX3P26022 RN7SL542P-201ENST00000467147 294 ntBASIC3.28□□□□□ -1.88
PTX3P26022 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
PTX3P26022 RNU6-794P-201ENST00000517261 64 ntBASIC3.28□□□□□ -1.88
PTX3P26022 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.28□□□□□ -1.88
PTX3P26022 UBL5P4-201ENST00000562584 236 ntBASIC3.28□□□□□ -1.88
PTX3P26022 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.28□□□□□ -1.88
PTX3P26022 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.28□□□□□ -1.88
PTX3P26022 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PTX3P26022 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.28□□□□□ -1.88
PTX3P26022 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.28□□□□□ -1.88
PTX3P26022 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTX3P26022 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.89
PTX3P26022 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.28□□□□□ -1.89
PTX3P26022 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.27□□□□□ -1.89
PTX3P26022 AL359854.1-201ENST00000614203 1594 ntBASIC3.27□□□□□ -1.89
PTX3P26022 RNU6-655P-201ENST00000362858 107 ntBASIC3.27□□□□□ -1.89
PTX3P26022 RNU6-245P-201ENST00000384020 107 ntBASIC3.27□□□□□ -1.89
PTX3P26022 Y_RNA.489-201ENST00000384410 101 ntBASIC3.27□□□□□ -1.89
PTX3P26022 MIR487A-201ENST00000385009 80 ntBASIC3.27□□□□□ -1.89
PTX3P26022 MIR329-1-201ENST00000385028 80 ntBASIC3.27□□□□□ -1.89
PTX3P26022 MT-TW-201ENST00000387382 68 ntBASIC3.27□□□□□ -1.89
PTX3P26022 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.27□□□□□ -1.89
PTX3P26022 AL079342.1-201ENST00000401460 267 ntBASIC3.27□□□□□ -1.89
PTX3P26022 RNU6-121P-201ENST00000410525 99 ntBASIC3.27□□□□□ -1.89
PTX3P26022 AC126124.2-201ENST00000413542 321 ntBASIC3.27□□□□□ -1.89
PTX3P26022 AC096920.1-201ENST00000423991 241 ntBASIC3.27□□□□□ -1.89
PTX3P26022 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
PTX3P26022 SNORD127-201ENST00000458892 86 ntBASIC3.27□□□□□ -1.89
PTX3P26022 AC091179.1-201ENST00000461606 579 ntBASIC3.27□□□□□ -1.89
PTX3P26022 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.27□□□□□ -1.89
PTX3P26022 AC093663.1-201ENST00000497190 394 ntBASIC3.27□□□□□ -1.89
PTX3P26022 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.27□□□□□ -1.89
PTX3P26022 FCF1P8-201ENST00000510322 597 ntBASIC3.27□□□□□ -1.89
PTX3P26022 AC023632.4-201ENST00000517783 191 ntBASIC3.27□□□□□ -1.89
PTX3P26022 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.27□□□□□ -1.89
PTX3P26022 CYCSP23-201ENST00000519781 313 ntBASIC3.27□□□□□ -1.89
PTX3P26022 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.27□□□□□ -1.89
PTX3P26022 AC023157.2-201ENST00000540596 141 ntBASIC3.27□□□□□ -1.89
PTX3P26022 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.27□□□□□ -1.89
PTX3P26022 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.27□□□□□ -1.89
PTX3P26022 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.27□□□□□ -1.89
PTX3P26022 MIR376A1-201ENST00000616574 68 ntBASIC3.27□□□□□ -1.89
PTX3P26022 AC039056.2-201ENST00000622261 511 ntBASIC3.27□□□□□ -1.89
PTX3P26022 AC110079.1-202ENST00000635213 138 ntBASIC3.27□□□□□ -1.89
PTX3P26022 AC012442.3-202ENST00000636742 206 ntBASIC3.27□□□□□ -1.89
PTX3P26022 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTX3P26022 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTX3P26022 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.27□□□□□ -1.89
PTX3P26022 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
PTX3P26022 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTX3P26022 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTX3P26022 Y_RNA.105-201ENST00000363182 111 ntBASIC3.26□□□□□ -1.89
PTX3P26022 Y_RNA.307-201ENST00000365022 117 ntBASIC3.26□□□□□ -1.89
PTX3P26022 DYNLT3P1-201ENST00000378574 347 ntBASIC3.26□□□□□ -1.89
PTX3P26022 RNU6-1145P-201ENST00000384246 107 ntBASIC3.26□□□□□ -1.89
PTX3P26022 Y_RNA.462-201ENST00000384268 102 ntBASIC3.26□□□□□ -1.89
PTX3P26022 PTMAP2-201ENST00000397627 327 ntBASIC3.26□□□□□ -1.89
PTX3P26022 MIR208B-201ENST00000401172 77 ntBASIC3.26□□□□□ -1.89
PTX3P26022 CBX3P9-201ENST00000402326 552 ntBASIC3.26□□□□□ -1.89
PTX3P26022 RNA5SP201-201ENST00000410316 124 ntBASIC3.26□□□□□ -1.89
PTX3P26022 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.26□□□□□ -1.89
PTX3P26022 RPS3P1-201ENST00000456781 192 ntBASIC3.26□□□□□ -1.89
PTX3P26022 RNU6-1132P-201ENST00000459214 107 ntBASIC3.26□□□□□ -1.89
PTX3P26022 AC112771.1-201ENST00000463581 102 ntBASIC3.26□□□□□ -1.89
PTX3P26022 AL121594.1-201ENST00000475906 575 ntBASIC3.26□□□□□ -1.89
PTX3P26022 TRBVB-201ENST00000477100 408 ntBASIC3.26□□□□□ -1.89
PTX3P26022 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
PTX3P26022 AC026403.1-201ENST00000518938 295 ntBASIC3.26□□□□□ -1.89
PTX3P26022 AC136932.1-201ENST00000574771 208 ntBASIC3.26□□□□□ -1.89
PTX3P26022 AC026241.1-201ENST00000517873 2142 ntBASIC3.26□□□□□ -1.89
PTX3P26022 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PTX3P26022 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PTX3P26022 RNA5SP361-201ENST00000362686 118 ntBASIC3.25□□□□□ -1.89
PTX3P26022 Y_RNA.143-201ENST00000363520 106 ntBASIC3.25□□□□□ -1.89
PTX3P26022 RNU6-1083P-201ENST00000384022 107 ntBASIC3.25□□□□□ -1.89
PTX3P26022 SNORD63-201ENST00000384262 68 ntBASIC3.25□□□□□ -1.89
PTX3P26022 Y_RNA.483-201ENST00000384380 101 ntBASIC3.25□□□□□ -1.89
PTX3P26022 SNORD17-201ENST00000390930 237 ntBASIC3.25□□□□□ -1.89
PTX3P26022 RNU6-1093P-201ENST00000391194 107 ntBASIC3.25□□□□□ -1.89
PTX3P26022 RNU6-1001P-201ENST00000411265 100 ntBASIC3.25□□□□□ -1.89
PTX3P26022 RPL21P38-201ENST00000418090 167 ntBASIC3.25□□□□□ -1.89
PTX3P26022 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.25□□□□□ -1.89
PTX3P26022 AC097463.2-201ENST00000421074 142 ntBASIC3.25□□□□□ -1.89
PTX3P26022 AC009414.1-201ENST00000427200 443 ntBASIC3.25□□□□□ -1.89
PTX3P26022 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.25□□□□□ -1.89
PTX3P26022 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.25□□□□□ -1.89
PTX3P26022 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.25□□□□□ -1.89
PTX3P26022 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms