Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 MIR6075-201ENST00000620782 95 ntBASIC3.44□□□□□ -1.86
KLF4O43474 SNORA50A-202ENST00000629536 136 ntBASIC3.44□□□□□ -1.86
KLF4O43474 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.44□□□□□ -1.86
KLF4O43474 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
KLF4O43474 AC093908.1-201ENST00000623125 8092 ntBASIC3.43□□□□□ -1.86
KLF4O43474 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
KLF4O43474 MIR423-201ENST00000362201 94 ntBASIC3.43□□□□□ -1.86
KLF4O43474 RNA5SP124-201ENST00000362739 110 ntBASIC3.43□□□□□ -1.86
KLF4O43474 RNU6-626P-201ENST00000363354 107 ntBASIC3.43□□□□□ -1.86
KLF4O43474 RNU6-727P-201ENST00000363592 107 ntBASIC3.43□□□□□ -1.86
KLF4O43474 SNORD32B-201ENST00000364460 84 ntBASIC3.43□□□□□ -1.86
KLF4O43474 SNORA12-201ENST00000391162 147 ntBASIC3.43□□□□□ -1.86
KLF4O43474 SNORA3.3-201ENST00000408712 125 ntBASIC3.43□□□□□ -1.86
KLF4O43474 RN7SKP156-201ENST00000410308 342 ntBASIC3.43□□□□□ -1.86
KLF4O43474 RHEBP3-201ENST00000411920 351 ntBASIC3.43□□□□□ -1.86
KLF4O43474 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.43□□□□□ -1.86
KLF4O43474 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.43□□□□□ -1.86
KLF4O43474 AC117440.1-201ENST00000474107 571 ntBASIC3.43□□□□□ -1.86
KLF4O43474 TRBVB-201ENST00000477100 408 ntBASIC3.43□□□□□ -1.86
KLF4O43474 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.43□□□□□ -1.86
KLF4O43474 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.43□□□□□ -1.86
KLF4O43474 MIR4300-201ENST00000581016 96 ntBASIC3.43□□□□□ -1.86
KLF4O43474 AL449363.1-201ENST00000617815 186 ntBASIC3.43□□□□□ -1.86
KLF4O43474 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.43□□□□□ -1.86
KLF4O43474 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KLF4O43474 Z82209.1-201ENST00000422141 2135 ntBASIC3.43□□□□□ -1.86
KLF4O43474 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KLF4O43474 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KLF4O43474 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.42□□□□□ -1.86
KLF4O43474 SNORA71.3-201ENST00000362582 128 ntBASIC3.42□□□□□ -1.86
KLF4O43474 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.42□□□□□ -1.86
KLF4O43474 RNU6-806P-201ENST00000365147 105 ntBASIC3.42□□□□□ -1.86
KLF4O43474 Y_RNA.376-201ENST00000365638 108 ntBASIC3.42□□□□□ -1.86
KLF4O43474 RNU6-937P-201ENST00000384325 106 ntBASIC3.42□□□□□ -1.86
KLF4O43474 RNU6-21P-201ENST00000384710 107 ntBASIC3.42□□□□□ -1.86
KLF4O43474 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.42□□□□□ -1.86
KLF4O43474 NDUFB1P1-201ENST00000435191 180 ntBASIC3.42□□□□□ -1.86
KLF4O43474 AL161788.1-201ENST00000441805 169 ntBASIC3.42□□□□□ -1.86
KLF4O43474 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.42□□□□□ -1.86
KLF4O43474 RBMY2UP-201ENST00000453474 324 ntBASIC3.42□□□□□ -1.86
KLF4O43474 SEPT14P8-201ENST00000508026 178 ntBASIC3.42□□□□□ -1.86
KLF4O43474 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.42□□□□□ -1.86
KLF4O43474 AK6P2-201ENST00000549020 471 ntBASIC3.42□□□□□ -1.86
KLF4O43474 AC018448.1-201ENST00000552843 316 ntBASIC3.42□□□□□ -1.86
KLF4O43474 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.42□□□□□ -1.86
KLF4O43474 AC005176.2-201ENST00000596933 147 ntBASIC3.42□□□□□ -1.86
KLF4O43474 AC011373.1-201ENST00000607270 237 ntBASIC3.42□□□□□ -1.86
KLF4O43474 AC062037.2-201ENST00000610137 73 ntBASIC3.42□□□□□ -1.86
KLF4O43474 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.42□□□□□ -1.86
KLF4O43474 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KLF4O43474 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KLF4O43474 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.42□□□□□ -1.86
KLF4O43474 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KLF4O43474 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
KLF4O43474 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KLF4O43474 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KLF4O43474 SNORA73.2-201ENST00000364946 201 ntBASIC3.41□□□□□ -1.86
KLF4O43474 RNA5SP97-201ENST00000365006 84 ntBASIC3.41□□□□□ -1.86
KLF4O43474 RNU6-20P-201ENST00000384106 107 ntBASIC3.41□□□□□ -1.86
KLF4O43474 RNU6-1274P-201ENST00000384557 107 ntBASIC3.41□□□□□ -1.86
KLF4O43474 U8.12-201ENST00000384701 133 ntBASIC3.41□□□□□ -1.86
KLF4O43474 AL138878.1-201ENST00000405131 347 ntBASIC3.41□□□□□ -1.86
KLF4O43474 SNORA57.3-201ENST00000411095 141 ntBASIC3.41□□□□□ -1.86
KLF4O43474 AC005002.2-201ENST00000438228 269 ntBASIC3.41□□□□□ -1.86
KLF4O43474 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
KLF4O43474 RPS29P31-201ENST00000446147 164 ntBASIC3.41□□□□□ -1.86
KLF4O43474 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
KLF4O43474 RNU6-107P-201ENST00000516643 102 ntBASIC3.41□□□□□ -1.86
KLF4O43474 RNU6-570P-201ENST00000517051 105 ntBASIC3.41□□□□□ -1.86
KLF4O43474 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.41□□□□□ -1.86
KLF4O43474 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.41□□□□□ -1.86
KLF4O43474 RRN3P3-201ENST00000549207 578 ntBASIC3.41□□□□□ -1.86
KLF4O43474 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.41□□□□□ -1.86
KLF4O43474 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.41□□□□□ -1.86
KLF4O43474 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.41□□□□□ -1.86
KLF4O43474 SNORD113-5-201ENST00000607261 78 ntBASIC3.41□□□□□ -1.86
KLF4O43474 AC107871.2-201ENST00000612894 502 ntBASIC3.41□□□□□ -1.86
KLF4O43474 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.41□□□□□ -1.86
KLF4O43474 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KLF4O43474 AC068205.3-201ENST00000636385 468 ntBASIC3.41□□□□□ -1.86
KLF4O43474 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
KLF4O43474 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
KLF4O43474 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KLF4O43474 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
KLF4O43474 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.86
KLF4O43474 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
KLF4O43474 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.4□□□□□ -1.87
KLF4O43474 Y_RNA.188-201ENST00000363952 111 ntBASIC3.4□□□□□ -1.87
KLF4O43474 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.4□□□□□ -1.87
KLF4O43474 RNU6-1026P-201ENST00000384465 108 ntBASIC3.4□□□□□ -1.87
KLF4O43474 U8.11-201ENST00000384699 133 ntBASIC3.4□□□□□ -1.87
KLF4O43474 RNA5SP475-201ENST00000410568 110 ntBASIC3.4□□□□□ -1.87
KLF4O43474 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.4□□□□□ -1.87
KLF4O43474 AC074290.1-201ENST00000448883 135 ntBASIC3.4□□□□□ -1.87
KLF4O43474 U8.18-201ENST00000459285 133 ntBASIC3.4□□□□□ -1.87
KLF4O43474 RPL26P26-201ENST00000480251 434 ntBASIC3.4□□□□□ -1.87
KLF4O43474 Y_RNA.668-201ENST00000516233 93 ntBASIC3.4□□□□□ -1.87
KLF4O43474 RNU7-110P-201ENST00000516891 62 ntBASIC3.4□□□□□ -1.87
KLF4O43474 SCARNA14-201ENST00000516903 136 ntBASIC3.4□□□□□ -1.87
KLF4O43474 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms