Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AL356157.2-201ENST00000605122 111 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 uc_338.11-201ENST00000619132 160 ntBASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.51□□□□□ -2.17
LRRC40Q9H9A6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 MTND4P14-201ENST00000435799 1354 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 MTND5P9-201ENST00000503854 1755 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 U3.9-201ENST00000363823 204 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 SNORD70.1-201ENST00000391007 85 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 RPS29P13-201ENST00000402041 169 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 MIR1267-201ENST00000408723 78 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 MTND1P18-201ENST00000448191 573 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 RPS27AP8-201ENST00000452665 445 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 AC079382.1-201ENST00000493346 557 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 MTND1P22-201ENST00000510572 951 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 RNU6-415P-201ENST00000516252 97 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 SUMO2P18-201ENST00000518873 252 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 AP001372.4-201ENST00000524889 472 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 PCGEM1.1-201ENST00000613431 131 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
LRRC40Q9H9A6 AC092268.1-201ENST00000342691 405 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 MIR340-201ENST00000362125 95 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 RNU4-48P-201ENST00000365559 182 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 SNORA32.2-201ENST00000384049 122 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 RNU6-296P-201ENST00000384608 107 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 RNA5SP201-201ENST00000410316 124 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 RNU2-41P-201ENST00000410991 178 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 CYCSP46-201ENST00000423569 204 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 RPL31P3-201ENST00000458430 332 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 AC079140.5-201ENST00000507882 310 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 AK3P2-201ENST00000507976 429 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 HMGB1P33-201ENST00000563485 527 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 MIR4703-201ENST00000577728 79 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 AC245014.2-201ENST00000603689 287 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 AC246785.4-201ENST00000605374 287 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 AC068205.3-201ENST00000636385 468 ntBASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.49□□□□□ -2.17
LRRC40Q9H9A6 RNU6-271P-201ENST00000363858 105 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AC068050.1-201ENST00000394891 380 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AL117339.3-201ENST00000418733 162 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AL354695.1-201ENST00000427935 228 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AL133396.1-201ENST00000432048 687 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 SNAP23P1-201ENST00000433229 246 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 RNU7-14P-201ENST00000459331 62 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 RNU2-69P-201ENST00000516061 100 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 RNU5F-4P-201ENST00000516581 114 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 RNU6-548P-201ENST00000517083 115 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AP003034.1-201ENST00000534621 422 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AC103996.1-201ENST00000555468 102 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 RSL24D1P11-201ENST00000591045 491 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 VN1R80P-201ENST00000597126 338 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AC078795.3-201ENST00000602913 472 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AC002044.1-201ENST00000606707 158 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 AC007494.3-201ENST00000624660 743 ntBASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
LRRC40Q9H9A6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 RNU6-60P-201ENST00000364792 103 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 RNU6-827P-201ENST00000365553 106 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 RNU6-456P-201ENST00000384493 107 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 SNORA16.2-201ENST00000390991 127 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 SNORA12.2-201ENST00000391040 156 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 UBE2V1P8-201ENST00000437166 265 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 AL022238.1-201ENST00000442557 355 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 AC022364.2-201ENST00000457963 554 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 TOMM22P6-201ENST00000465035 409 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 RPL36AP21-201ENST00000490372 323 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 AC016632.1-201ENST00000503994 196 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 MTCO3P28-201ENST00000513351 515 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 RNU6-1098P-201ENST00000516772 96 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 SNORA18.6-201ENST00000516792 115 ntBASIC1.47□□□□□ -2.17
LRRC40Q9H9A6 SNORA25.17-201ENST00000517184 124 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms