Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
EPHB3P54753 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.67□□□□□ -1.82
EPHB3P54753 MFSD8-233ENST00000641482 4860 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
EPHB3P54753 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
EPHB3P54753 CEP170P1-201ENST00000502249 4587 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 RBBP8P1-201ENST00000449447 1844 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
EPHB3P54753 RNU6-626P-201ENST00000363354 107 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 RNU6-137P-201ENST00000363680 108 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 Y_RNA.217-201ENST00000364214 105 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 Y_RNA.308-201ENST00000365043 101 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
EPHB3P54753 RNU6-20P-201ENST00000384106 107 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 RNU6-281P-201ENST00000384212 103 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 RNA5SP31-201ENST00000411144 127 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 AC005326.1-201ENST00000429197 123 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.66□□□□□ -1.82
EPHB3P54753 Y_RNA.641-201ENST00000459414 105 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 RN7SL594P-201ENST00000470590 287 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 BTF3L4P4-201ENST00000506381 449 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.66□□□□□ -1.82
EPHB3P54753 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.66□□□□□ -1.82
EPHB3P54753 RNU6-313P-201ENST00000516317 112 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 RN7SKP83-201ENST00000516512 178 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 SNORA43.2-201ENST00000516652 128 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 RNA5SP468-201ENST00000516782 93 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 AC016256.1-201ENST00000547971 354 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 MIR5692C2-201ENST00000577959 77 ntBASIC3.66□□□□□ -1.82
EPHB3P54753 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
EPHB3P54753 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.66□□□□□ -1.82
EPHB3P54753 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
EPHB3P54753 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
EPHB3P54753 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.82
EPHB3P54753 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
EPHB3P54753 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.65□□□□□ -1.82
EPHB3P54753 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.65□□□□□ -1.83
EPHB3P54753 AL079305.1-201ENST00000623159 3008 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 Y_RNA.262-201ENST00000364641 102 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 Y_RNA.272-201ENST00000364696 102 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 RNU6-1175P-201ENST00000365200 107 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 U8.10-201ENST00000384260 133 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 MIR329-1-201ENST00000385028 80 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 U3.37-201ENST00000408528 213 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 RN7SKP111-201ENST00000410349 271 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 RPL27AP8-201ENST00000424277 446 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.65□□□□□ -1.83
EPHB3P54753 POLR2KP2-201ENST00000438155 177 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 MRPS10P1-201ENST00000448483 130 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.65□□□□□ -1.83
EPHB3P54753 HMGN2P7-201ENST00000456186 273 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 KC877373.1-201ENST00000479066 408 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 FCF1P8-201ENST00000510322 597 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.65□□□□□ -1.83
EPHB3P54753 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.65□□□□□ -1.83
EPHB3P54753 SNORA31.8-201ENST00000516327 108 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 RNA5SP291-201ENST00000517222 105 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 IGKV2-26-201ENST00000518305 343 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.65□□□□□ -1.83
EPHB3P54753 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.65□□□□□ -1.83
EPHB3P54753 AC012531.5-201ENST00000611375 151 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 AC005296.1-201ENST00000616145 209 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 MIR3651-201ENST00000630427 90 ntBASIC3.65□□□□□ -1.83
EPHB3P54753 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
EPHB3P54753 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
EPHB3P54753 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.64□□□□□ -1.83
EPHB3P54753 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
EPHB3P54753 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
EPHB3P54753 MIR423-201ENST00000362201 94 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 RNU5B-2P-201ENST00000363036 113 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 RNU6-961P-201ENST00000363893 105 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 SNORA38.1-201ENST00000364172 131 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 Y_RNA.319-201ENST00000365138 92 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 Y_RNA.343-201ENST00000365354 112 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 RNU6-1130P-201ENST00000365434 107 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 SNORD116-18-201ENST00000383961 92 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 SNORA29-201ENST00000384183 140 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 RNU6-1145P-201ENST00000384246 107 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 RNU6-417P-201ENST00000384712 107 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 RNU6-1154P-201ENST00000391001 104 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 HMGN2P8-201ENST00000391458 268 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EPHB3P54753 Y_RNA.597-201ENST00000410463 100 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 RNU6-1001P-201ENST00000411265 100 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 AL159169.1-201ENST00000421119 127 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 RPL23AP95-201ENST00000426806 265 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 AC006989.1-201ENST00000427212 131 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 AC005300.1-201ENST00000428401 373 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EPHB3P54753 AC243964.1-201ENST00000441814 261 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.64□□□□□ -1.83
EPHB3P54753 AC006026.2-201ENST00000457376 180 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 AC093663.1-201ENST00000497190 394 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 AP004607.1-201ENST00000524456 203 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.64□□□□□ -1.83
EPHB3P54753 TRAV28-201ENST00000557548 323 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EPHB3P54753 AC135776.4-201ENST00000624300 1904 ntBASIC3.64□□□□□ -1.83
EPHB3P54753 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms