Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RNA5SP240-201ENST00000365355 128 ntBASIC3.47□□□□□ -1.85
KLF4O43474 Y_RNA.462-201ENST00000384268 102 ntBASIC3.47□□□□□ -1.85
KLF4O43474 Y_RNA.597-201ENST00000410463 100 ntBASIC3.47□□□□□ -1.85
KLF4O43474 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.47□□□□□ -1.85
KLF4O43474 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.47□□□□□ -1.85
KLF4O43474 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.47□□□□□ -1.85
KLF4O43474 RPL23AP58-201ENST00000440453 469 ntBASIC3.47□□□□□ -1.85
KLF4O43474 AC006539.3-201ENST00000454258 129 ntBASIC3.47□□□□□ -1.85
KLF4O43474 AC146507.2-201ENST00000460608 476 ntBASIC3.47□□□□□ -1.85
KLF4O43474 RNU2-44P-201ENST00000516795 194 ntBASIC3.47□□□□□ -1.85
KLF4O43474 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.47□□□□□ -1.85
KLF4O43474 AC078899.3-201ENST00000599065 212 ntBASIC3.47□□□□□ -1.85
KLF4O43474 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KLF4O43474 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KLF4O43474 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
KLF4O43474 AC080128.1-201ENST00000474389 1917 ntBASIC3.46□□□□□ -1.85
KLF4O43474 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.85
KLF4O43474 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
KLF4O43474 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.46□□□□□ -1.86
KLF4O43474 SNORA18.2-201ENST00000383865 132 ntBASIC3.46□□□□□ -1.86
KLF4O43474 Y_RNA.498-201ENST00000384460 102 ntBASIC3.46□□□□□ -1.86
KLF4O43474 Y_RNA.512-201ENST00000384518 102 ntBASIC3.46□□□□□ -1.86
KLF4O43474 MIR30B-201ENST00000384850 88 ntBASIC3.46□□□□□ -1.86
KLF4O43474 MIR549A-201ENST00000385268 96 ntBASIC3.46□□□□□ -1.86
KLF4O43474 MIR670-201ENST00000390142 98 ntBASIC3.46□□□□□ -1.86
KLF4O43474 AL033519.2-201ENST00000403958 392 ntBASIC3.46□□□□□ -1.86
KLF4O43474 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.46□□□□□ -1.86
KLF4O43474 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.46□□□□□ -1.86
KLF4O43474 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.46□□□□□ -1.86
KLF4O43474 AC009237.7-201ENST00000447357 229 ntBASIC3.46□□□□□ -1.86
KLF4O43474 AL133547.1-201ENST00000448546 220 ntBASIC3.46□□□□□ -1.86
KLF4O43474 RPS23P5-201ENST00000495419 428 ntBASIC3.46□□□□□ -1.86
KLF4O43474 AC025465.3-201ENST00000510570 311 ntBASIC3.46□□□□□ -1.86
KLF4O43474 RNU6-408P-201ENST00000515910 100 ntBASIC3.46□□□□□ -1.86
KLF4O43474 RN7SKP83-201ENST00000516512 178 ntBASIC3.46□□□□□ -1.86
KLF4O43474 RNU6-344P-201ENST00000516635 111 ntBASIC3.46□□□□□ -1.86
KLF4O43474 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.46□□□□□ -1.86
KLF4O43474 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.46□□□□□ -1.86
KLF4O43474 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.46□□□□□ -1.86
KLF4O43474 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.46□□□□□ -1.86
KLF4O43474 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.46□□□□□ -1.86
KLF4O43474 SNORD11B-201ENST00000607707 90 ntBASIC3.46□□□□□ -1.86
KLF4O43474 AC012442.3-202ENST00000636742 206 ntBASIC3.46□□□□□ -1.86
KLF4O43474 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KLF4O43474 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
KLF4O43474 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
KLF4O43474 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KLF4O43474 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KLF4O43474 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KLF4O43474 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KLF4O43474 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
KLF4O43474 AL161912.2-201ENST00000565707 3007 ntBASIC3.45□□□□□ -1.86
KLF4O43474 Y_RNA.222-201ENST00000364264 102 ntBASIC3.45□□□□□ -1.86
KLF4O43474 RNU6-283P-201ENST00000364788 107 ntBASIC3.45□□□□□ -1.86
KLF4O43474 RNU6-26P-201ENST00000383985 107 ntBASIC3.45□□□□□ -1.86
KLF4O43474 RNU6-1310P-201ENST00000384153 107 ntBASIC3.45□□□□□ -1.86
KLF4O43474 SNORD63-201ENST00000384262 68 ntBASIC3.45□□□□□ -1.86
KLF4O43474 SNORA48.8-201ENST00000391324 134 ntBASIC3.45□□□□□ -1.86
KLF4O43474 RNU2-63P-201ENST00000410792 194 ntBASIC3.45□□□□□ -1.86
KLF4O43474 RNU6-1328P-201ENST00000410938 106 ntBASIC3.45□□□□□ -1.86
KLF4O43474 AL513477.1-202ENST00000417061 214 ntBASIC3.45□□□□□ -1.86
KLF4O43474 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KLF4O43474 IFNA11P-201ENST00000446352 526 ntBASIC3.45□□□□□ -1.86
KLF4O43474 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.45□□□□□ -1.86
KLF4O43474 AC091179.3-201ENST00000474761 144 ntBASIC3.45□□□□□ -1.86
KLF4O43474 RN7SL323P-201ENST00000494712 295 ntBASIC3.45□□□□□ -1.86
KLF4O43474 CYCSP30-201ENST00000546447 172 ntBASIC3.45□□□□□ -1.86
KLF4O43474 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.45□□□□□ -1.86
KLF4O43474 AC233702.2-202ENST00000562547 291 ntBASIC3.45□□□□□ -1.86
KLF4O43474 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.45□□□□□ -1.86
KLF4O43474 SNORA62.6-201ENST00000606322 83 ntBASIC3.45□□□□□ -1.86
KLF4O43474 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.45□□□□□ -1.86
KLF4O43474 AL121772.2-201ENST00000614331 297 ntBASIC3.45□□□□□ -1.86
KLF4O43474 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KLF4O43474 AC138915.1-201ENST00000565427 1685 ntBASIC3.45□□□□□ -1.86
KLF4O43474 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
KLF4O43474 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KLF4O43474 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
KLF4O43474 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
KLF4O43474 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KLF4O43474 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KLF4O43474 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
KLF4O43474 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
KLF4O43474 Y_RNA.230-201ENST00000364348 109 ntBASIC3.44□□□□□ -1.86
KLF4O43474 SNORA72.2-201ENST00000365028 127 ntBASIC3.44□□□□□ -1.86
KLF4O43474 MIR200C-201ENST00000384980 68 ntBASIC3.44□□□□□ -1.86
KLF4O43474 SNORD115-46-201ENST00000390982 71 ntBASIC3.44□□□□□ -1.86
KLF4O43474 FO393413.1-201ENST00000402892 195 ntBASIC3.44□□□□□ -1.86
KLF4O43474 AC002075.2-201ENST00000425207 252 ntBASIC3.44□□□□□ -1.86
KLF4O43474 YME1L1P1-201ENST00000429435 297 ntBASIC3.44□□□□□ -1.86
KLF4O43474 RNU6-625P-201ENST00000459412 107 ntBASIC3.44□□□□□ -1.86
KLF4O43474 AC083906.5-201ENST00000503722 328 ntBASIC3.44□□□□□ -1.86
KLF4O43474 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.44□□□□□ -1.86
KLF4O43474 RNU5F-4P-201ENST00000516581 114 ntBASIC3.44□□□□□ -1.86
KLF4O43474 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.44□□□□□ -1.86
KLF4O43474 MIR3671-201ENST00000580455 88 ntBASIC3.44□□□□□ -1.86
KLF4O43474 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.44□□□□□ -1.86
KLF4O43474 AL713866.2-201ENST00000603579 219 ntBASIC3.44□□□□□ -1.86
KLF4O43474 MZT1P2-201ENST00000604387 248 ntBASIC3.44□□□□□ -1.86
KLF4O43474 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms