Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 FGF7P1-201ENST00000582820 288 ntBASIC2.39□□□□□ -2.03
CMTM3Q96MX0 SNORD14A-201ENST00000606526 91 ntBASIC2.39□□□□□ -2.03
CMTM3Q96MX0 MIR3976-201ENST00000606807 139 ntBASIC2.39□□□□□ -2.03
CMTM3Q96MX0 AL022345.1-201ENST00000607292 135 ntBASIC2.39□□□□□ -2.03
CMTM3Q96MX0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.38□□□□□ -2.03
CMTM3Q96MX0 SNORA63.1-201ENST00000362493 131 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 SNORD32B-201ENST00000364460 84 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 RNU6-1286P-201ENST00000383871 107 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 RNU6-611P-201ENST00000384276 104 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 SNORA54-201ENST00000384281 123 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 RNU6-784P-201ENST00000384330 106 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 SNORA46.1-201ENST00000391069 153 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 SNORA48.5-201ENST00000391143 135 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 RNU2-48P-201ENST00000410694 191 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 RNA5SP120-201ENST00000410900 112 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 MTND3P8-201ENST00000412909 339 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AC012306.1-201ENST00000423267 114 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AC022018.1-201ENST00000430685 241 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 ARL5AP4-201ENST00000430731 512 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 DAP3P1-201ENST00000441522 278 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AL353572.1-201ENST00000442490 417 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AC021146.2-201ENST00000504736 556 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 RNU6-667P-201ENST00000517186 102 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AC026464.5-201ENST00000562497 722 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 MIR4742-201ENST00000581069 85 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 MIR5092-201ENST00000583139 88 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AC124303.1-201ENST00000605703 360 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AC019193.3-201ENST00000609144 554 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AL132822.1-201ENST00000617063 513 ntBASIC2.38□□□□□ -2.03
CMTM3Q96MX0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CMTM3Q96MX0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CMTM3Q96MX0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CMTM3Q96MX0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 SNORA29-201ENST00000384183 140 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 MIR517A-201ENST00000385001 87 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 MIR1294-201ENST00000408503 142 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 AC005326.1-201ENST00000429197 123 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 CR769767.1-201ENST00000436337 346 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 IFNA11P-201ENST00000446352 526 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 MTND1P17-201ENST00000448961 204 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 SNORA4.4-201ENST00000515921 135 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 AP005639.2-201ENST00000527592 928 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 MIR3126-201ENST00000577443 74 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 MIR4444-1-201ENST00000581696 74 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 MIR4444-2-201ENST00000584390 74 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 POLR3GP2-201ENST00000588366 668 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 PCGEM1.1-201ENST00000613431 131 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 AL161423.1-201ENST00000613700 262 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 AC005520.5-201ENST00000613926 164 ntBASIC2.37□□□□□ -2.03
CMTM3Q96MX0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
CMTM3Q96MX0 CBX3P1-201ENST00000325243 554 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 SNORA71.3-201ENST00000362582 128 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 MT-TL1-201ENST00000386347 75 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 RNA5SP181-201ENST00000410246 98 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 EDDM3CP-201ENST00000415977 425 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 AL139396.1-201ENST00000421137 167 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 RBMX2P4-201ENST00000441256 376 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 PPP1R2P5-201ENST00000457256 603 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 SLC25A15P5-201ENST00000508033 253 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 AC046134.1-201ENST00000514454 666 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 RNU6-965P-201ENST00000516721 96 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.36□□□□□ -2.03
CMTM3Q96MX0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.36□□□□□ -2.03
CMTM3Q96MX0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CMTM3Q96MX0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CMTM3Q96MX0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 Y_RNA.160-201ENST00000363677 92 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 U3.9-201ENST00000363823 204 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 Y_RNA.279-201ENST00000364763 95 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 RNU6-767P-201ENST00000384132 107 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 RNU6-378P-201ENST00000384324 107 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 RNVU1-14-201ENST00000384770 164 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms