Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CPEB3Q8NE35 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.11□□□□□ -1.91
CPEB3Q8NE35 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 PWAR6-201ENST00000552334 4618 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 RNU6-858P-201ENST00000362436 107 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 RNA5SP361-201ENST00000362686 118 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 Y_RNA.117-201ENST00000363294 101 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 RNU6-1280P-201ENST00000365211 107 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 RNU6-142P-201ENST00000384019 107 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 Y_RNA.785-201ENST00000384290 109 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 MIR544A-201ENST00000384855 91 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 UBA52P6-201ENST00000399822 382 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 U3.39-201ENST00000408569 239 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 Y_RNA.602-201ENST00000410535 92 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 BPY2DP-201ENST00000422208 265 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 RPL26P9-201ENST00000457466 433 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AP001025.1-201ENST00000486139 332 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 GZMAP1-201ENST00000503054 631 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AC006445.2-201ENST00000510061 472 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AC104619.4-201ENST00000510773 249 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 RNU6-1114P-201ENST00000516022 107 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 NACAP3-201ENST00000552100 481 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AL391261.3-201ENST00000557194 520 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AC021739.1-201ENST00000559631 174 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AC073657.2-201ENST00000605661 303 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AC098479.1-201ENST00000609225 154 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 RMST_8.1-201ENST00000610287 165 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 AC002076.2-201ENST00000617362 122 ntBASIC3.1□□□□□ -1.91
CPEB3Q8NE35 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CPEB3Q8NE35 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CPEB3Q8NE35 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
CPEB3Q8NE35 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CPEB3Q8NE35 RNU6-879P-201ENST00000364328 108 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 SNORA73.2-201ENST00000364946 201 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 RNU6-926P-201ENST00000384075 107 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 SNORD63-201ENST00000384262 68 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 Y_RNA.462-201ENST00000384268 102 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 Y_RNA.504-201ENST00000384481 104 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 SNORA1.3-201ENST00000384676 136 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 MIR23B-201ENST00000384832 97 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 MIR218-2-201ENST00000385006 110 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 MIR487A-201ENST00000385009 80 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 MIR10B-201ENST00000385011 110 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 RPS4XP3-201ENST00000398541 413 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.09□□□□□ -1.91
CPEB3Q8NE35 RPS29P4-201ENST00000414733 161 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 AL353705.1-201ENST00000433468 480 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 GOT2P5-201ENST00000433995 546 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.09□□□□□ -1.91
CPEB3Q8NE35 AC096638.1-201ENST00000444678 216 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 HSPE1P25-201ENST00000455484 251 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 RPS4XP22-201ENST00000480755 780 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 SNORA67.7-201ENST00000516664 135 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.09□□□□□ -1.91
CPEB3Q8NE35 AP006245.1-201ENST00000522549 120 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 HIGD1AP1-201ENST00000550979 275 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 AC009163.5-201ENST00000575421 637 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 MIR4738-201ENST00000579134 87 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 U3.45-201ENST00000607547 219 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 U4.6-201ENST00000621618 127 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 AC009093.8-201ENST00000641769 292 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 AC103988.1-201ENST00000566382 2177 ntBASIC3.09□□□□□ -1.91
CPEB3Q8NE35 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CPEB3Q8NE35 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CPEB3Q8NE35 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.09□□□□□ -1.92
CPEB3Q8NE35 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.09□□□□□ -1.92
CPEB3Q8NE35 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.09□□□□□ -1.92
CPEB3Q8NE35 AC110491.1-201ENST00000562191 2010 ntBASIC3.09□□□□□ -1.92
CPEB3Q8NE35 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CPEB3Q8NE35 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CPEB3Q8NE35 AC058791.1-201ENST00000608412 3198 ntBASIC3.08□□□□□ -1.92
CPEB3Q8NE35 Y_RNA.54-201ENST00000362766 105 ntBASIC3.08□□□□□ -1.92
CPEB3Q8NE35 RNU6-1266P-201ENST00000362794 105 ntBASIC3.08□□□□□ -1.92
CPEB3Q8NE35 RNU6-1141P-201ENST00000364520 107 ntBASIC3.08□□□□□ -1.92
CPEB3Q8NE35 Y_RNA.277-201ENST00000364754 102 ntBASIC3.08□□□□□ -1.92
CPEB3Q8NE35 MIR7-3-201ENST00000384898 110 ntBASIC3.08□□□□□ -1.92
CPEB3Q8NE35 SNORD12B-201ENST00000410433 91 ntBASIC3.08□□□□□ -1.92
CPEB3Q8NE35 RN7SKP61-201ENST00000410642 295 ntBASIC3.08□□□□□ -1.92
CPEB3Q8NE35 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.08□□□□□ -1.92
CPEB3Q8NE35 AC005002.2-201ENST00000438228 269 ntBASIC3.08□□□□□ -1.92
CPEB3Q8NE35 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.08□□□□□ -1.92
CPEB3Q8NE35 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.08□□□□□ -1.92
CPEB3Q8NE35 SNRPGP7-201ENST00000469016 106 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms