Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MIR3939-201ENST00000582614 106 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 MIR3136-201ENST00000583498 78 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 SNORD98-201ENST00000636377 67 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 AL773545.4-201ENST00000637262 310 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 AL513478.4-201ENST00000641636 310 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NFKB1P19838 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NFKB1P19838 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.75
NFKB1P19838 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.15□□□□□ -1.75
NFKB1P19838 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NFKB1P19838 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NFKB1P19838 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NFKB1P19838 RNU6-600P-201ENST00000362524 99 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 snoU2_19.4-201ENST00000364329 80 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 SNORA26.5-201ENST00000391215 123 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 EI24P2-201ENST00000397776 1076 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 RNA5SP306-201ENST00000411087 107 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 BPY2DP-201ENST00000422208 265 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 AC091390.1-201ENST00000433904 331 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.14□□□□□ -1.75
NFKB1P19838 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.14□□□□□ -1.75
NFKB1P19838 AC025627.2-201ENST00000576220 160 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.14□□□□□ -1.75
NFKB1P19838 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.14□□□□□ -1.75
NFKB1P19838 MIR3658-201ENST00000636291 56 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 CUL1P1-201ENST00000509510 2425 ntBASIC4.14□□□□□ -1.75
NFKB1P19838 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.14□□□□□ -1.75
NFKB1P19838 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NFKB1P19838 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.14□□□□□ -1.75
NFKB1P19838 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NFKB1P19838 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.14□□□□□ -1.75
NFKB1P19838 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.13□□□□□ -1.75
NFKB1P19838 AC068700.1-201ENST00000565862 3754 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.13□□□□□ -1.75
NFKB1P19838 FAM35BP-202ENST00000497389 3337 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
NFKB1P19838 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NFKB1P19838 MIR539-201ENST00000365690 78 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 Y_RNA.415-201ENST00000384012 112 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 SNORA3C-201ENST00000408792 125 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 HSPE1P12-201ENST00000412576 301 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.13□□□□□ -1.75
NFKB1P19838 CYCSP48-201ENST00000417124 323 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 VDAC1P3-201ENST00000434069 851 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.13□□□□□ -1.75
NFKB1P19838 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.13□□□□□ -1.75
NFKB1P19838 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.13□□□□□ -1.75
NFKB1P19838 AC103975.1-201ENST00000482506 483 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.13□□□□□ -1.75
NFKB1P19838 AC006199.1-201ENST00000548728 219 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 AL162713.1-201ENST00000604480 262 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 MIR6758-201ENST00000620653 63 ntBASIC4.13□□□□□ -1.75
NFKB1P19838 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NFKB1P19838 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NFKB1P19838 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.12□□□□□ -1.75
NFKB1P19838 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NFKB1P19838 AC010329.5-201ENST00000623497 2174 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NFKB1P19838 Y_RNA.287-201ENST00000364853 94 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 SNORA8.3-201ENST00000384679 139 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 MIR626-201ENST00000385032 94 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 RPS4XP13-201ENST00000483219 789 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 RPL31P61-201ENST00000496160 376 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 MRPL49P2-201ENST00000521066 465 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.12□□□□□ -1.75
NFKB1P19838 AC074050.1-201ENST00000563247 211 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 AC025946.2-201ENST00000603398 234 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
NFKB1P19838 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.12□□□□□ -1.75
NFKB1P19838 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NFKB1P19838 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NFKB1P19838 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
NFKB1P19838 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NFKB1P19838 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NFKB1P19838 USP8P1-201ENST00000494673 3183 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NFKB1P19838 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NFKB1P19838 SNORA60-201ENST00000362396 134 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 RNU6-153P-201ENST00000364422 104 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.11□□□□□ -1.75
NFKB1P19838 SNORA20-201ENST00000384662 132 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.11□□□□□ -1.75
NFKB1P19838 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.11□□□□□ -1.75
NFKB1P19838 AC146507.2-201ENST00000460608 476 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 AC010618.1-201ENST00000469924 477 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 AIG1P1-201ENST00000503376 148 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 SNORA31.9-201ENST00000516429 84 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 RNA5SP468-201ENST00000516782 93 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 RNU6-1234P-201ENST00000516877 103 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 AC109810.1-201ENST00000534066 224 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.11□□□□□ -1.75
NFKB1P19838 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.11□□□□□ -1.75
NFKB1P19838 AC024220.1-201ENST00000603675 484 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 AC083809.1-201ENST00000615051 472 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NFKB1P19838 AC008873.1-201ENST00000625051 138 ntBASIC4.11□□□□□ -1.75
NFKB1P19838 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.11□□□□□ -1.75
NFKB1P19838 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 302.8 ms