Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.54□□□□□ -1.84
NPHS1O60500 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPHS1O60500 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPHS1O60500 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPHS1O60500 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.53□□□□□ -1.84
NPHS1O60500 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.53□□□□□ -1.84
NPHS1O60500 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPHS1O60500 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPHS1O60500 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPHS1O60500 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NPHS1O60500 Y_RNA.180-201ENST00000363867 113 ntBASIC3.53□□□□□ -1.84
NPHS1O60500 Y_RNA.270-201ENST00000364693 104 ntBASIC3.53□□□□□ -1.84
NPHS1O60500 RNU6-740P-201ENST00000364734 105 ntBASIC3.53□□□□□ -1.84
NPHS1O60500 RNU6-1175P-201ENST00000365200 107 ntBASIC3.53□□□□□ -1.84
NPHS1O60500 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NPHS1O60500 EI24P2-201ENST00000397776 1076 ntBASIC3.53□□□□□ -1.84
NPHS1O60500 RPS26P42-201ENST00000413485 326 ntBASIC3.53□□□□□ -1.84
NPHS1O60500 AL591419.1-201ENST00000427423 339 ntBASIC3.53□□□□□ -1.84
NPHS1O60500 RPL32P34-201ENST00000486380 400 ntBASIC3.53□□□□□ -1.84
NPHS1O60500 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.53□□□□□ -1.84
NPHS1O60500 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHS1O60500 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHS1O60500 AC010999.1-201ENST00000611856 324 ntBASIC3.53□□□□□ -1.84
NPHS1O60500 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.53□□□□□ -1.84
NPHS1O60500 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
NPHS1O60500 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
NPHS1O60500 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPHS1O60500 AL136164.4-201ENST00000625013 2135 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPHS1O60500 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPHS1O60500 Y_RNA.199-201ENST00000364014 102 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 RNU1-64P-201ENST00000365443 163 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 Y_RNA.446-201ENST00000384178 104 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 RNU6-651P-201ENST00000411040 105 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 AC112220.1-201ENST00000434628 355 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHS1O60500 TPT1P12-201ENST00000448968 492 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 RPL23AP3-201ENST00000453844 468 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 Y_RNA.644-201ENST00000459006 113 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.52□□□□□ -1.85
NPHS1O60500 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHS1O60500 Y_RNA.674-201ENST00000516362 113 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 RNA5SP54-201ENST00000516951 92 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 AC026333.2-201ENST00000542164 106 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 AC026470.2-201ENST00000561492 181 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHS1O60500 MIR5187-201ENST00000583479 76 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 AC008749.1-201ENST00000597650 306 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 AC091152.3-201ENST00000604227 325 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 AC037487.3-201ENST00000606668 112 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPHS1O60500 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
NPHS1O60500 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPHS1O60500 ZNF204P-201ENST00000416749 2397 ntBASIC3.52□□□□□ -1.85
NPHS1O60500 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPHS1O60500 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.51□□□□□ -1.85
NPHS1O60500 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.51□□□□□ -1.85
NPHS1O60500 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPHS1O60500 SNORA70.2-201ENST00000364506 135 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 RNU6-198P-201ENST00000384258 104 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 RNU6-19P-201ENST00000384718 107 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 MIR591-201ENST00000385290 95 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 Y_RNA.595-201ENST00000410403 105 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 RNU2-49P-201ENST00000410666 184 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 Y_RNA.793-201ENST00000411222 111 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 PTGES3P4-201ENST00000426243 356 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 OR4C10P-201ENST00000434991 931 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 HMGN2P20-201ENST00000437531 273 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.51□□□□□ -1.85
NPHS1O60500 AC010401.1-201ENST00000463867 348 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 SNORA25.14-201ENST00000516481 132 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 NDUFB9P3-201ENST00000521269 501 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 AC115990.1-201ENST00000526957 301 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 AC055872.1-201ENST00000570978 278 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHS1O60500 AL512605.2-201ENST00000592972 256 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 AC068831.7-201ENST00000616954 363 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 IGHVIII-44-202ENST00000636235 289 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 SNORD98-201ENST00000636377 67 ntBASIC3.51□□□□□ -1.85
NPHS1O60500 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPHS1O60500 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.5□□□□□ -1.85
NPHS1O60500 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
NPHS1O60500 AL353746.1-201ENST00000566293 6881 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 MIR30E-201ENST00000362104 92 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 MIR411-201ENST00000362239 96 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 RNU6-799P-201ENST00000363567 107 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 Y_RNA.230-201ENST00000364348 109 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 RNU6-886P-201ENST00000384319 105 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 RNU1-13P-201ENST00000384499 162 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 MIR548M-201ENST00000408260 86 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AL117339.2-201ENST00000430475 180 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHS1O60500 AL357552.1-201ENST00000445254 415 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHS1O60500 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.5□□□□□ -1.85
NPHS1O60500 RN7SL594P-201ENST00000470590 287 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 AC107626.1-201ENST00000471084 183 ntBASIC3.5□□□□□ -1.85
NPHS1O60500 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 227.5 ms