Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-708P-201ENST00000384217 107 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 MIR625-201ENST00000385047 85 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
KRT40Q6A162 RPL21P3-201ENST00000395517 478 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 MIR1261-201ENST00000408659 82 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 YPEL5P1-201ENST00000419731 367 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 TOMM20P4-201ENST00000427861 435 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 MTCO3P29-201ENST00000432119 779 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 AL512844.2-201ENST00000433990 593 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 OSTCP8-201ENST00000445117 448 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 AC146507.2-201ENST00000460608 476 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 AC109329.1-201ENST00000518744 317 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.54□□□□□ -1.84
KRT40Q6A162 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRT40Q6A162 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.54□□□□□ -1.84
KRT40Q6A162 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.54□□□□□ -1.84
KRT40Q6A162 AC090517.1-201ENST00000569307 266 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.54□□□□□ -1.84
KRT40Q6A162 FTX_3.1-201ENST00000610451 147 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 U6.99-201ENST00000637524 83 ntBASIC3.54□□□□□ -1.84
KRT40Q6A162 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRT40Q6A162 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.54□□□□□ -1.84
KRT40Q6A162 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRT40Q6A162 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRT40Q6A162 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRT40Q6A162 MTND5P7-201ENST00000413558 1798 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
KRT40Q6A162 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
KRT40Q6A162 AP000560.1-201ENST00000624150 1937 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 RNA5SP189-201ENST00000364920 115 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 RNU5E-7P-201ENST00000365290 117 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.53□□□□□ -1.84
KRT40Q6A162 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.53□□□□□ -1.84
KRT40Q6A162 AC098831.1-201ENST00000440661 216 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 UQCRHP3-201ENST00000451503 251 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 RN7SL75P-201ENST00000461926 281 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 RPL30P10-201ENST00000488148 337 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 AC008885.1-201ENST00000514930 301 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 RNU6-377P-201ENST00000515965 102 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 RNA5SP356-201ENST00000515972 94 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 AC008962.1-201ENST00000605729 304 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 AC100812.1-201ENST00000607622 580 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 MIR622-201ENST00000638396 96 ntBASIC3.53□□□□□ -1.84
KRT40Q6A162 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
KRT40Q6A162 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
KRT40Q6A162 AC007256.1-201ENST00000392253 2765 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRT40Q6A162 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRT40Q6A162 AC093831.2-201ENST00000624393 3427 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 RNU6-227P-201ENST00000362865 103 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 RNU6-942P-201ENST00000363002 107 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 RNU6-379P-201ENST00000363813 104 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 Y_RNA.276-201ENST00000364732 109 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 SNORA54-201ENST00000384281 123 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 Y_RNA.556-201ENST00000384677 113 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 MT-TW-201ENST00000387382 68 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 Y_RNA.592-201ENST00000410274 109 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.52□□□□□ -1.85
KRT40Q6A162 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 FCF1P4-201ENST00000448326 183 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.52□□□□□ -1.85
KRT40Q6A162 MTCO3P8-201ENST00000453691 755 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.52□□□□□ -1.85
KRT40Q6A162 MTND4LP22-201ENST00000508209 276 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.52□□□□□ -1.85
KRT40Q6A162 OR5D17P-201ENST00000531492 978 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.52□□□□□ -1.85
KRT40Q6A162 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 AC062037.2-201ENST00000610137 73 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 AC027309.3-201ENST00000623419 351 ntBASIC3.52□□□□□ -1.85
KRT40Q6A162 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRT40Q6A162 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
KRT40Q6A162 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRT40Q6A162 AC093908.1-201ENST00000623125 8092 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.51□□□□□ -1.85
KRT40Q6A162 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
KRT40Q6A162 RNU6-105P-201ENST00000363909 104 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 Y_RNA.551-201ENST00000384661 102 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 SAR1AP2-201ENST00000392696 594 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 RNU6-130P-201ENST00000411112 103 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.51□□□□□ -1.85
KRT40Q6A162 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.51□□□□□ -1.85
KRT40Q6A162 RNU6-408P-201ENST00000515910 100 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 SNORA25.11-201ENST00000515935 105 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 Y_RNA.680-201ENST00000516441 93 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 RNU6-1282P-201ENST00000516735 96 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.51□□□□□ -1.85
KRT40Q6A162 AC144568.1-201ENST00000520139 137 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 AC023157.2-201ENST00000540596 141 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 GTF3AP2-201ENST00000557014 266 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 MIR4782-201ENST00000577987 79 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.51□□□□□ -1.85
KRT40Q6A162 AC125232.2-201ENST00000592457 143 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 AC007318.2-201ENST00000620999 243 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 SCARNA4-202ENST00000625402 129 ntBASIC3.51□□□□□ -1.85
KRT40Q6A162 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRT40Q6A162 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.5□□□□□ -1.85
KRT40Q6A162 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KRT40Q6A162 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms