Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL42Q9P2K6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL42Q9P2K6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL42Q9P2K6 MIR4790-201ENST00000577799 79 ntBASIC3.17□□□□□ -1.9
KLHL42Q9P2K6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.17□□□□□ -1.9
KLHL42Q9P2K6 DUXAP9-208ENST00000622815 614 ntBASIC3.17□□□□□ -1.9
KLHL42Q9P2K6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KLHL42Q9P2K6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KLHL42Q9P2K6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 SNORA71.3-201ENST00000362582 128 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 Y_RNA.123-201ENST00000363338 102 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 SNORD56.3-201ENST00000363507 71 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 Y_RNA.301-201ENST00000364990 103 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 SNORA25B-201ENST00000365507 128 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RNU6-1032P-201ENST00000384100 107 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RNU1-52P-201ENST00000384190 164 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 MIR7-3-201ENST00000384898 110 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 MIR524-201ENST00000385242 87 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 SNORA46.1-201ENST00000391069 153 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AL591034.2-201ENST00000402839 359 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RNU4-47P-201ENST00000410876 114 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RNU2-32P-201ENST00000411193 191 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AC007064.1-201ENST00000412238 351 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RPS26P42-201ENST00000413485 326 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AC012306.1-201ENST00000423267 114 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AL590632.1-201ENST00000424289 371 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AL513124.1-201ENST00000450410 614 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 MTND3P10-201ENST00000450967 341 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AL139109.1-201ENST00000455491 297 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RPL21P10-201ENST00000463521 490 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AC145146.1-201ENST00000496370 254 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 PTP4A1P4-201ENST00000512479 322 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RNU1-143P-201ENST00000516296 146 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RNU6-273P-201ENST00000516937 96 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 MIR4801-201ENST00000582704 82 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RPL12P50-201ENST00000603116 116 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 MIR92B-201ENST00000607575 96 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 U1.23-201ENST00000610293 146 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 RNU1-68P-201ENST00000615382 146 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 U1.39-201ENST00000621562 146 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AC091903.1-201ENST00000624322 454 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AL353743.1-202ENST00000431724 1695 ntBASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KLHL42Q9P2K6 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.9
KLHL42Q9P2K6 MTCO1P12-201ENST00000414273 1543 ntBASIC3.15□□□□□ -1.9
KLHL42Q9P2K6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 RNU4-15P-201ENST00000362613 141 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 U3.6-201ENST00000363622 211 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 U3.9-201ENST00000363823 204 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 RNU6-596P-201ENST00000365395 98 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 RNU6-611P-201ENST00000384276 104 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 U3.19-201ENST00000390893 196 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 RNA5SP171-201ENST00000391071 115 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 MIR1294-201ENST00000408503 142 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 RNA5SP201-201ENST00000410316 124 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AC005741.1-201ENST00000511094 432 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AC091874.1-201ENST00000511402 339 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AC034114.1-201ENST00000520293 285 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AC026271.5-201ENST00000577873 130 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AL162713.1-201ENST00000604480 262 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 MIR622-201ENST00000638396 96 ntBASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
KLHL42Q9P2K6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 Y_RNA.597-201ENST00000410463 100 ntBASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 MTND1P23-201ENST00000416931 372 ntBASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 AC107399.1-201ENST00000451226 265 ntBASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 AC091153.1-201ENST00000466297 402 ntBASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 AC109925.1-201ENST00000478069 331 ntBASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.14□□□□□ -1.91
KLHL42Q9P2K6 NDUFA5P6-201ENST00000542110 379 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 301.6 ms