Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 MIR3671-201ENST00000580455 88 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 MIR4503-201ENST00000582187 83 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AC008962.1-201ENST00000605729 304 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AC012531.5-201ENST00000611375 151 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AC087588.2-201ENST00000617667 426 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.35□□□□□ -1.87
PNKPQ96T60 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.35□□□□□ -1.87
PNKPQ96T60 SCARNA15.3-201ENST00000626315 122 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 SCARNA4.1-201ENST00000628597 123 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PNKPQ96T60 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PNKPQ96T60 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PNKPQ96T60 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PNKPQ96T60 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PNKPQ96T60 Y_RNA.39-201ENST00000362620 98 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 MIR518D-201ENST00000385014 87 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 HSPE1P26-201ENST00000405341 275 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 U3.37-201ENST00000408528 213 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 HMGN2P30-201ENST00000423237 256 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 TMEM167AP1-201ENST00000423409 219 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.34□□□□□ -1.87
PNKPQ96T60 MTCYBP9-201ENST00000431021 303 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.34□□□□□ -1.87
PNKPQ96T60 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.34□□□□□ -1.87
PNKPQ96T60 MTATP6P7-201ENST00000453315 681 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 SNORA59A-201ENST00000459326 152 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 U8.20-201ENST00000459445 131 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 AP001486.1-201ENST00000463339 476 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 RPL23AP62-201ENST00000463396 453 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 RPS29P27-201ENST00000463711 170 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 AL049873.1-201ENST00000480540 376 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.34□□□□□ -1.87
PNKPQ96T60 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.34□□□□□ -1.87
PNKPQ96T60 MTCO2P24-201ENST00000515611 426 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.34□□□□□ -1.87
PNKPQ96T60 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.34□□□□□ -1.87
PNKPQ96T60 AL355598.1-201ENST00000604169 202 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 MIR1244-1-201ENST00000612829 85 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 SCARNA4-202ENST00000625402 129 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 MIR1244-3-201ENST00000635744 85 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 MIR1244-2-201ENST00000636449 85 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 MIR1244-4-202ENST00000636813 85 ntBASIC3.34□□□□□ -1.87
PNKPQ96T60 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PNKPQ96T60 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
PNKPQ96T60 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.34□□□□□ -1.88
PNKPQ96T60 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 MTND5P9-201ENST00000503854 1755 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 ZNF299P-201ENST00000406845 1804 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
PNKPQ96T60 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PNKPQ96T60 MIR422A-201ENST00000362286 90 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 SNORD50.1-201ENST00000362987 71 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 RNU6-270P-201ENST00000364131 105 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 RNU6-823P-201ENST00000391042 103 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 EIF4EP2-201ENST00000422816 654 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.33□□□□□ -1.88
PNKPQ96T60 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.33□□□□□ -1.88
PNKPQ96T60 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 RNU7-169P-201ENST00000459456 61 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 RN7SL863P-201ENST00000462370 296 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 RPS29P20-201ENST00000489592 171 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.33□□□□□ -1.88
PNKPQ96T60 MIR5696-201ENST00000578474 85 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 AC020895.1-201ENST00000595362 272 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.33□□□□□ -1.88
PNKPQ96T60 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 MIR4272-201ENST00000635924 64 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PNKPQ96T60 AC090740.1-201ENST00000623193 2262 ntBASIC3.33□□□□□ -1.88
PNKPQ96T60 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.33□□□□□ -1.88
PNKPQ96T60 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.32□□□□□ -1.88
PNKPQ96T60 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PNKPQ96T60 Y_RNA.47-201ENST00000362697 108 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 RNU4-42P-201ENST00000364738 142 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 U3.26-201ENST00000391236 204 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 RPS29P13-201ENST00000402041 169 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 RNU6-101P-201ENST00000410323 104 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 RNU2-37P-201ENST00000410695 177 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 RN7SKP58-201ENST00000411010 305 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 RPL26P27-201ENST00000414397 437 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.32□□□□□ -1.88
PNKPQ96T60 DPH3P2-201ENST00000422618 250 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 OR2AQ1P-201ENST00000451972 200 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 AC112492.4-201ENST00000456549 352 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.32□□□□□ -1.88
PNKPQ96T60 AC010265.1-201ENST00000513509 211 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.32□□□□□ -1.88
PNKPQ96T60 RNU6-475P-201ENST00000516073 104 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 SNORA43.2-201ENST00000516652 128 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 SYF2P1-201ENST00000550658 413 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.32□□□□□ -1.88
PNKPQ96T60 AC004584.2-201ENST00000570407 410 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.32□□□□□ -1.88
PNKPQ96T60 AL451007.1-201ENST00000595491 289 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 MTND4LP5-201ENST00000605152 292 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 AC009318.2-201ENST00000610917 651 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 AC097372.5-201ENST00000623665 376 ntBASIC3.32□□□□□ -1.88
PNKPQ96T60 AC018692.3-201ENST00000623929 123 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms