Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT40Q6A162 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
KRT40Q6A162 FTLP6-201ENST00000355274 422 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 Y_RNA.210-201ENST00000364161 110 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 RNU6-1318P-201ENST00000365389 103 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 SNORA63.7-201ENST00000365579 123 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 Z98749.2-208ENST00000381646 500 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 SNORA7.4-201ENST00000384249 137 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 MIR521-1-201ENST00000384902 87 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 RPL21P1-201ENST00000399532 476 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 MIR1252-201ENST00000408861 65 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT40Q6A162 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRT40Q6A162 RPS15AP10-201ENST00000432472 382 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRT40Q6A162 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT40Q6A162 AC079354.2-201ENST00000453523 154 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 snoU109.2-201ENST00000459316 135 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 AC109925.1-201ENST00000478069 331 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 SNORA40.14-201ENST00000516543 86 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 Y_RNA.715-201ENST00000517082 110 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 AP004242.1-201ENST00000533701 349 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.6□□□□□ -1.83
KRT40Q6A162 Z98751.3-201ENST00000604447 521 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 MIR8076-201ENST00000611401 83 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT40Q6A162 AC018692.3-201ENST00000623929 123 ntBASIC3.6□□□□□ -1.83
KRT40Q6A162 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRT40Q6A162 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
KRT40Q6A162 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
KRT40Q6A162 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRT40Q6A162 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRT40Q6A162 ZNF299P-201ENST00000406845 1804 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 RNU6-874P-201ENST00000362390 105 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 RNU6-595P-201ENST00000363944 107 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 RNU1-140P-201ENST00000365040 165 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 Y_RNA.380-201ENST00000365663 111 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 Y_RNA.424-201ENST00000384063 103 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 RNU6-784P-201ENST00000384330 106 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 EI24P2-201ENST00000397776 1076 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
KRT40Q6A162 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.59□□□□□ -1.83
KRT40Q6A162 EIF4EP2-201ENST00000422816 654 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 NDUFB4P6-201ENST00000436819 366 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.59□□□□□ -1.83
KRT40Q6A162 RNA5SP291-201ENST00000517222 105 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 AC009812.2-201ENST00000517657 457 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 AP005902.1-201ENST00000521358 186 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 CASP1P1-201ENST00000526345 212 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 AC040926.1-201ENST00000530195 238 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT40Q6A162 CYCSP39-201ENST00000565821 309 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 AC004584.2-201ENST00000570407 410 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 MIR3186-201ENST00000577404 85 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 UBL5P2-201ENST00000583788 219 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT40Q6A162 AC009318.2-201ENST00000610917 651 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 AC099506.2-201ENST00000623074 221 ntBASIC3.59□□□□□ -1.83
KRT40Q6A162 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
KRT40Q6A162 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
KRT40Q6A162 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
KRT40Q6A162 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
KRT40Q6A162 MTND5P9-201ENST00000503854 1755 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
KRT40Q6A162 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.58□□□□□ -1.84
KRT40Q6A162 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.58□□□□□ -1.84
KRT40Q6A162 RNU6-336P-201ENST00000364891 107 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 SNORD14.1-201ENST00000365609 90 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 Y_RNA.396-201ENST00000383949 103 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 RNU4-47P-201ENST00000410876 114 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 AL590383.1-201ENST00000428602 75 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 MTND3P9-201ENST00000429526 346 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 VDAC1P3-201ENST00000434069 851 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 OR2AQ1P-201ENST00000451972 200 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.58□□□□□ -1.84
KRT40Q6A162 RNU7-169P-201ENST00000459456 61 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 AC005921.1-201ENST00000510589 286 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.58□□□□□ -1.84
KRT40Q6A162 RNU6-612P-201ENST00000516909 102 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 RNU6-703P-201ENST00000516946 107 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 AC245166.1-201ENST00000521012 253 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 H3F3AP1-201ENST00000559984 334 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.58□□□□□ -1.84
KRT40Q6A162 AC006600.1-201ENST00000572529 153 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.58□□□□□ -1.84
KRT40Q6A162 AC016727.2-201ENST00000603988 621 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 AC006023.2-201ENST00000609916 167 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 AC004852.3-201ENST00000614131 326 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 U2.21-201ENST00000637295 81 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 U4.7-201ENST00000638126 106 ntBASIC3.58□□□□□ -1.84
KRT40Q6A162 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRT40Q6A162 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRT40Q6A162 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
KRT40Q6A162 AC091152.2-201ENST00000591628 2569 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRT40Q6A162 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
KRT40Q6A162 Y_RNA.26-201ENST00000362539 101 ntBASIC3.57□□□□□ -1.84
KRT40Q6A162 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms