Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 IGHV3-76-201ENST00000522465 295 ntBASIC3.45□□□□□ -1.86
PTX3P26022 AC115990.1-201ENST00000526957 301 ntBASIC3.45□□□□□ -1.86
PTX3P26022 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.45□□□□□ -1.86
PTX3P26022 TGIF1P1-201ENST00000558095 802 ntBASIC3.45□□□□□ -1.86
PTX3P26022 AC021231.3-201ENST00000558497 370 ntBASIC3.45□□□□□ -1.86
PTX3P26022 AC025281.1-201ENST00000567026 265 ntBASIC3.45□□□□□ -1.86
PTX3P26022 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.45□□□□□ -1.86
PTX3P26022 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTX3P26022 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PTX3P26022 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.44□□□□□ -1.86
PTX3P26022 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTX3P26022 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.44□□□□□ -1.86
PTX3P26022 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PTX3P26022 RNU6-1285P-201ENST00000363480 105 ntBASIC3.44□□□□□ -1.86
PTX3P26022 RNU6-137P-201ENST00000363680 108 ntBASIC3.44□□□□□ -1.86
PTX3P26022 RNY3P4-201ENST00000384428 101 ntBASIC3.44□□□□□ -1.86
PTX3P26022 Y_RNA.504-201ENST00000384481 104 ntBASIC3.44□□□□□ -1.86
PTX3P26022 U8.11-201ENST00000384699 133 ntBASIC3.44□□□□□ -1.86
PTX3P26022 U8.12-201ENST00000384701 133 ntBASIC3.44□□□□□ -1.86
PTX3P26022 SNORA26.3-201ENST00000391119 136 ntBASIC3.44□□□□□ -1.86
PTX3P26022 RNU2-49P-201ENST00000410666 184 ntBASIC3.44□□□□□ -1.86
PTX3P26022 Y_RNA.618-201ENST00000410949 107 ntBASIC3.44□□□□□ -1.86
PTX3P26022 AL356968.1-201ENST00000416622 474 ntBASIC3.44□□□□□ -1.86
PTX3P26022 CYCSP48-201ENST00000417124 323 ntBASIC3.44□□□□□ -1.86
PTX3P26022 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.44□□□□□ -1.86
PTX3P26022 AC244670.1-201ENST00000436879 112 ntBASIC3.44□□□□□ -1.86
PTX3P26022 SETP5-201ENST00000437270 562 ntBASIC3.44□□□□□ -1.86
PTX3P26022 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.44□□□□□ -1.86
PTX3P26022 U8.18-201ENST00000459285 133 ntBASIC3.44□□□□□ -1.86
PTX3P26022 RNU7-87P-201ENST00000459343 62 ntBASIC3.44□□□□□ -1.86
PTX3P26022 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.44□□□□□ -1.86
PTX3P26022 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTX3P26022 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.44□□□□□ -1.86
PTX3P26022 SNORA51-201ENST00000606420 132 ntBASIC3.44□□□□□ -1.86
PTX3P26022 AP003355.3-201ENST00000623465 114 ntBASIC3.44□□□□□ -1.86
PTX3P26022 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.44□□□□□ -1.86
PTX3P26022 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.44□□□□□ -1.86
PTX3P26022 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PTX3P26022 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTX3P26022 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTX3P26022 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTX3P26022 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.44□□□□□ -1.86
PTX3P26022 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
PTX3P26022 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.43□□□□□ -1.86
PTX3P26022 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PTX3P26022 AC017079.2-201ENST00000416102 485 ntBASIC3.43□□□□□ -1.86
PTX3P26022 AL365496.1-201ENST00000426885 215 ntBASIC3.43□□□□□ -1.86
PTX3P26022 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.43□□□□□ -1.86
PTX3P26022 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.43□□□□□ -1.86
PTX3P26022 TOMM22P6-201ENST00000465035 409 ntBASIC3.43□□□□□ -1.86
PTX3P26022 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.43□□□□□ -1.86
PTX3P26022 SNORA25.11-201ENST00000515935 105 ntBASIC3.43□□□□□ -1.86
PTX3P26022 Y_RNA.713-201ENST00000517013 96 ntBASIC3.43□□□□□ -1.86
PTX3P26022 AP002770.2-201ENST00000543613 532 ntBASIC3.43□□□□□ -1.86
PTX3P26022 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.43□□□□□ -1.86
PTX3P26022 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.43□□□□□ -1.86
PTX3P26022 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.43□□□□□ -1.86
PTX3P26022 AL391813.1-201ENST00000603098 260 ntBASIC3.43□□□□□ -1.86
PTX3P26022 AL121655.1-201ENST00000605811 308 ntBASIC3.43□□□□□ -1.86
PTX3P26022 AC096772.1-201ENST00000609146 564 ntBASIC3.43□□□□□ -1.86
PTX3P26022 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.43□□□□□ -1.86
PTX3P26022 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTX3P26022 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.43□□□□□ -1.86
PTX3P26022 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
PTX3P26022 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PTX3P26022 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTX3P26022 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTX3P26022 AC093010.3-201ENST00000570269 15214 ntBASIC3.42□□□□□ -1.86
PTX3P26022 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
PTX3P26022 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTX3P26022 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTX3P26022 RNA5SP51-201ENST00000364750 119 ntBASIC3.42□□□□□ -1.86
PTX3P26022 RNU6-611P-201ENST00000384276 104 ntBASIC3.42□□□□□ -1.86
PTX3P26022 RNU6-713P-201ENST00000384761 107 ntBASIC3.42□□□□□ -1.86
PTX3P26022 MIR32-201ENST00000384965 70 ntBASIC3.42□□□□□ -1.86
PTX3P26022 MT-TG-201ENST00000387429 68 ntBASIC3.42□□□□□ -1.86
PTX3P26022 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PTX3P26022 RNU1-139P-201ENST00000391307 165 ntBASIC3.42□□□□□ -1.86
PTX3P26022 AL035423.1-201ENST00000420331 213 ntBASIC3.42□□□□□ -1.86
PTX3P26022 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.42□□□□□ -1.86
PTX3P26022 RPL21P2-201ENST00000440049 481 ntBASIC3.42□□□□□ -1.86
PTX3P26022 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.42□□□□□ -1.86
PTX3P26022 SNORD105B-201ENST00000458770 79 ntBASIC3.42□□□□□ -1.86
PTX3P26022 SNRPGP7-201ENST00000469016 106 ntBASIC3.42□□□□□ -1.86
PTX3P26022 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
PTX3P26022 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.42□□□□□ -1.86
PTX3P26022 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.42□□□□□ -1.86
PTX3P26022 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTX3P26022 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.42□□□□□ -1.86
PTX3P26022 HSPE1P20-201ENST00000538133 289 ntBASIC3.42□□□□□ -1.86
PTX3P26022 AC007458.1-201ENST00000542812 373 ntBASIC3.42□□□□□ -1.86
PTX3P26022 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.42□□□□□ -1.86
PTX3P26022 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.42□□□□□ -1.86
PTX3P26022 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.42□□□□□ -1.86
PTX3P26022 AC105137.2-201ENST00000569073 466 ntBASIC3.42□□□□□ -1.86
PTX3P26022 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.42□□□□□ -1.86
PTX3P26022 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTX3P26022 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTX3P26022 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTX3P26022 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 273.5 ms