Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 APOBEC3AP1-201ENST00000511396 287 ntBASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 AC011406.1-201ENST00000512440 370 ntBASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 ENPP7P9-201ENST00000514456 627 ntBASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 RNA5SP464-201ENST00000516251 108 ntBASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 Y_RNA.685-201ENST00000516532 108 ntBASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 AP000867.2-201ENST00000532468 320 ntBASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 GNRHR2P1-201ENST00000555315 631 ntBASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 AL049872.1-201ENST00000556323 322 ntBASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 AL592182.3-201ENST00000642132 3304 ntBASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRTAP3-1Q9BYR8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AC112198.2-201ENST00000426589 6996 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AC093591.2-201ENST00000565254 3843 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RNU1-22P-201ENST00000363334 158 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RNY4P6-201ENST00000363667 96 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RNA5SP433-201ENST00000364491 114 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 SNORD31B-201ENST00000364977 69 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RNU6-1240P-201ENST00000365155 104 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RNU6-234P-201ENST00000365229 104 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 SNORA1-201ENST00000384107 130 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RNA5SP487-201ENST00000410186 122 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AL450023.3-201ENST00000440592 271 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RPS17P2-201ENST00000461663 408 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RN7SL441P-201ENST00000492388 296 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AC092349.1-201ENST00000504903 310 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AC097462.1-201ENST00000514125 324 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AC096725.1-201ENST00000514266 313 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 MIR449C-201ENST00000516047 92 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RNA5SP249-201ENST00000516127 99 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RNU2-58P-201ENST00000516403 183 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RNU6-1149P-201ENST00000516810 97 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AC027308.1-201ENST00000517993 110 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AC109329.2-201ENST00000519658 482 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RPL10P14-201ENST00000565265 298 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 RN7SL703P-201ENST00000578485 302 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 MIR8069-1-201ENST00000616627 86 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 MIR8069-2-201ENST00000621412 86 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 AC011266.1-201ENST00000624119 3569 ntBASIC2.59□□□□□ -1.99
KRTAP3-1Q9BYR8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-1Q9BYR8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-1Q9BYR8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-1Q9BYR8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.59□□□□□ -2
KRTAP3-1Q9BYR8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-1Q9BYR8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-1Q9BYR8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
KRTAP3-1Q9BYR8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 Y_RNA.198-201ENST00000364013 98 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 Y_RNA.362-201ENST00000365518 110 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 SNORD24-201ENST00000383884 75 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 SNORA2.3-201ENST00000383920 135 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 MIR450A2-201ENST00000385022 100 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 MIR759-201ENST00000390224 91 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 EIF4EP4-201ENST00000424916 578 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 RPL12P3-201ENST00000440080 396 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 AC010099.1-201ENST00000455434 375 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 RPL21P129-201ENST00000491732 478 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 MRPS36P2-201ENST00000512569 299 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 RNU2-34P-201ENST00000516534 121 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 RNU7-172P-201ENST00000517125 64 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 MIR1273E-201ENST00000581165 102 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 MIR4438-201ENST00000585271 93 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 AC013412.1-201ENST00000610687 192 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 RPSAP73-201ENST00000614820 330 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP3-1Q9BYR8 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms