Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC022616.6-201ENST00000520479 119 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.56□□□□□ -2.16
SCN4AP35499 LRRC34P1-201ENST00000542742 915 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.56□□□□□ -2.16
SCN4AP35499 ZNF519P3-201ENST00000557158 1032 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.56□□□□□ -2.16
SCN4AP35499 AC072046.2-201ENST00000618366 268 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 AC019226.2-201ENST00000625973 424 ntBASIC1.56□□□□□ -2.16
SCN4AP35499 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SCN4AP35499 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.56□□□□□ -2.16
SCN4AP35499 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SCN4AP35499 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SCN4AP35499 RNU6-658P-201ENST00000384606 106 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 MIR95-201ENST00000385072 81 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 CISD1P1-201ENST00000393907 327 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 RNU6-195P-201ENST00000411352 109 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 HMGN1P14-201ENST00000412459 517 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.55□□□□□ -2.16
SCN4AP35499 RPL22P13-201ENST00000493291 347 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.55□□□□□ -2.16
SCN4AP35499 SNORA31.18-201ENST00000517043 134 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 AC010186.2-204ENST00000537668 439 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 MTND3P12-201ENST00000559068 328 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 LINC00933-203ENST00000559812 219 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 AC012213.3-201ENST00000577199 777 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 MIR3913-1-201ENST00000577744 102 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.55□□□□□ -2.16
SCN4AP35499 AC040904.1-201ENST00000590850 223 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 AL161798.1-201ENST00000604630 131 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 AP001506.1-201ENST00000615444 211 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 AC009161.2-201ENST00000624626 138 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 AC095038.3-201ENST00000634439 195 ntBASIC1.55□□□□□ -2.16
SCN4AP35499 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SCN4AP35499 MIR412-201ENST00000362142 91 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 RNU6-395P-201ENST00000365662 106 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AF228730.1-201ENST00000397972 663 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 NDUFS5P1-201ENST00000405668 289 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 RPL21P90-201ENST00000415692 466 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 CALM2P2-201ENST00000428512 440 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 GTF2IP20-201ENST00000431663 360 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 NDUFB1P2-201ENST00000449477 176 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 MTCYBP1-201ENST00000454315 1119 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 AC004223.1-201ENST00000479840 271 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 FO393415.2-201ENST00000480085 343 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 MTCO3P9-201ENST00000506989 781 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.54□□□□□ -2.16
SCN4AP35499 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.54□□□□□ -2.16
SCN4AP35499 RNU6-232P-201ENST00000517144 64 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.54□□□□□ -2.16
SCN4AP35499 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 AC090888.1-201ENST00000561335 1141 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 AL138889.2-201ENST00000603883 242 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AC093648.1-201ENST00000623546 606 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.54□□□□□ -2.16
SCN4AP35499 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 FGF7P2-201ENST00000332473 296 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 RNU6-512P-201ENST00000364438 103 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 RNY4P34-201ENST00000364779 95 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 RNU6-1103P-201ENST00000384150 107 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 Y_RNA.534-201ENST00000384599 112 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.54□□□□□ -2.16
SCN4AP35499 GPR143P-201ENST00000434155 205 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AC119618.1-201ENST00000434191 222 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 MTND2P29-201ENST00000438595 412 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 HMGN2P10-201ENST00000448085 265 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 PSPHP1-201ENST00000450062 261 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 AC117503.1-201ENST00000472241 394 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 AC104806.1-201ENST00000508720 308 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN4AP35499 AP003033.1-201ENST00000527244 415 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 MRPS36P5-201ENST00000551909 298 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.54□□□□□ -2.16
SCN4AP35499 AC245014.2-201ENST00000603689 287 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AC246785.4-201ENST00000605374 287 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AL139286.2-201ENST00000606838 396 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 AC098614.4-201ENST00000607601 462 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SCN4AP35499 AC092140.2-201ENST00000618027 521 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 MIR5739-201ENST00000619803 80 ntBASIC1.54□□□□□ -2.16
SCN4AP35499 SNORD114-27-201ENST00000363766 70 ntBASIC1.53□□□□□ -2.16
SCN4AP35499 SNORD116-8-201ENST00000384365 95 ntBASIC1.53□□□□□ -2.16
SCN4AP35499 MIR1302-8-201ENST00000408342 128 ntBASIC1.53□□□□□ -2.16
SCN4AP35499 BTF3L4P1-201ENST00000413813 468 ntBASIC1.53□□□□□ -2.16
SCN4AP35499 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.53□□□□□ -2.16
SCN4AP35499 RNA5SP269-201ENST00000459032 137 ntBASIC1.53□□□□□ -2.16
SCN4AP35499 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.53□□□□□ -2.16
SCN4AP35499 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.53□□□□□ -2.16
SCN4AP35499 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 271 ms