Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AC005300.1-201ENST00000428401 373 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 WARS2P1-201ENST00000429678 537 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 NDUFB1P1-201ENST00000435191 180 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 GPM6BP3-201ENST00000442797 145 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 AC096638.1-201ENST00000444678 216 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 HSPE1P25-201ENST00000455484 251 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.66□□□□□ -1.82
NPHS1O60500 AP001025.1-201ENST00000486139 332 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 AC026784.1-201ENST00000507986 352 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 RN7SKP122-201ENST00000515923 296 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 RNU1-61P-201ENST00000516107 151 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPHS1O60500 AC016256.1-201ENST00000547971 354 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 UBL5P4-201ENST00000562584 236 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 MIR5571-201ENST00000577998 113 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 AL590392.1-201ENST00000604960 446 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 AC098479.1-201ENST00000609225 154 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 RNVU1-4-201ENST00000612985 164 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 AC073308.1-201ENST00000623696 305 ntBASIC3.66□□□□□ -1.82
NPHS1O60500 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHS1O60500 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHS1O60500 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPHS1O60500 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPHS1O60500 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
NPHS1O60500 AC007256.1-201ENST00000392253 2765 ntBASIC3.65□□□□□ -1.82
NPHS1O60500 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NPHS1O60500 RNU6-1141P-201ENST00000364520 107 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 Y_RNA.269-201ENST00000364685 89 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 Y_RNA.319-201ENST00000365138 92 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 Y_RNA.785-201ENST00000384290 109 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 MIR10B-201ENST00000385011 110 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 SNORD12B-201ENST00000410433 91 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 SNORA57.3-201ENST00000411095 141 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.65□□□□□ -1.83
NPHS1O60500 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHS1O60500 MRPL49P2-201ENST00000521066 465 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHS1O60500 HIGD1AP1-201ENST00000550979 275 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 MIR5695-201ENST00000579717 85 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHS1O60500 AL591034.3-201ENST00000605511 685 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 AC005296.1-201ENST00000616145 209 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.65□□□□□ -1.83
NPHS1O60500 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHS1O60500 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHS1O60500 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHS1O60500 CUL1P1-201ENST00000509510 2425 ntBASIC3.65□□□□□ -1.83
NPHS1O60500 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPHS1O60500 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPHS1O60500 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHS1O60500 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHS1O60500 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.64□□□□□ -1.83
NPHS1O60500 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHS1O60500 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPHS1O60500 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 RNU6-280P-201ENST00000364145 104 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 RNA5SP515-201ENST00000364570 118 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 Y_RNA.274-201ENST00000364714 101 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 U1.1-201ENST00000384101 164 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 RNU6-281P-201ENST00000384212 103 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHS1O60500 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHS1O60500 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHS1O60500 AC005002.2-201ENST00000438228 269 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 snoU13.6-201ENST00000458785 104 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 AC016632.1-201ENST00000503994 196 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 RNU6-182P-201ENST00000516970 105 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 RNU6-58P-201ENST00000517143 103 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHS1O60500 AC022695.1-201ENST00000522089 237 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 AP006245.1-201ENST00000522549 120 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHS1O60500 MIR4643-201ENST00000577473 78 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 HMGN2P15-201ENST00000585707 270 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 HSPE1P7-201ENST00000604681 321 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 AC110741.2-201ENST00000605278 268 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 BX284668.6-201ENST00000606899 438 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 MIR6748-201ENST00000610433 71 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 MIR6867-201ENST00000610636 67 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHS1O60500 MIR492-201ENST00000638676 116 ntBASIC3.64□□□□□ -1.83
NPHS1O60500 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPHS1O60500 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NPHS1O60500 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NPHS1O60500 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NPHS1O60500 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPHS1O60500 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPHS1O60500 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPHS1O60500 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NPHS1O60500 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.63□□□□□ -1.83
NPHS1O60500 AC110491.1-201ENST00000562191 2010 ntBASIC3.63□□□□□ -1.83
NPHS1O60500 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.63□□□□□ -1.83
NPHS1O60500 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPHS1O60500 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPHS1O60500 RNY1-201ENST00000364228 113 ntBASIC3.63□□□□□ -1.83
NPHS1O60500 RNU6-290P-201ENST00000365212 101 ntBASIC3.63□□□□□ -1.83
NPHS1O60500 RNU6-1062P-201ENST00000383908 107 ntBASIC3.63□□□□□ -1.83
NPHS1O60500 SNORD63-201ENST00000384262 68 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms