Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 snoU13.30-201ENST00000458951 104 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 MTND1P16-201ENST00000465177 898 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 TRBVA-201ENST00000498804 316 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 AC074344.1-201ENST00000512823 224 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 AC004987.4-201ENST00000603383 338 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 AL590095.2-201ENST00000604136 117 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 AC105129.3-201ENST00000605455 485 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 AC108706.1-201ENST00000611053 297 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 MTND5P33-201ENST00000571250 1450 ntBASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
TRAV13-1A0A0B4J241 RNU6-207P-201ENST00000384137 107 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-72P-201ENST00000384285 79 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 SNORD116-20-201ENST00000384529 92 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 RAP1BP3-201ENST00000407180 549 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 FCF1P10-201ENST00000407590 479 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 MRPS36P1-201ENST00000421291 307 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 AL365338.1-201ENST00000422282 858 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 GTF2IP13-201ENST00000438487 386 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 AL583843.1-201ENST00000456070 346 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 SNORD124-201ENST00000459577 104 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 AP000907.2-201ENST00000530827 353 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR1273C-201ENST00000578669 77 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR4524B-201ENST00000581569 115 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 RPL21P136-201ENST00000605378 396 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-87P-201ENST00000607561 108 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR6835-201ENST00000621552 64 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 AL133216.2-202ENST00000634512 349 ntBASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.46□□□□□ -2.34
TRAV13-1A0A0B4J241 SNORA75B-201ENST00000384053 137 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-1176P-201ENST00000390955 107 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 RPS26P5-201ENST00000418544 335 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 FO393414.1-201ENST00000428697 1184 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 snoU13.27-201ENST00000459278 104 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 RAP1BP2-201ENST00000478270 544 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 HMGN1P7-201ENST00000491722 313 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 AC005741.1-201ENST00000511094 432 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 AC008837.2-201ENST00000513076 418 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 RNA5SP168-201ENST00000516642 112 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-914P-201ENST00000516749 109 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-165P-201ENST00000517170 99 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 AC090142.3-201ENST00000519012 385 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 snoU13.31-201ENST00000607291 104 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 AL451064.1-201ENST00000607718 471 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 MTND5P42-201ENST00000637720 498 ntBASIC0.45□□□□□ -2.34
TRAV13-1A0A0B4J241 AC018630.2-201ENST00000534866 2403 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 SNORD3E-201ENST00000362899 217 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-1019P-201ENST00000364424 107 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 SNORD32B-201ENST00000364460 84 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-395P-201ENST00000365662 106 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 AL117342.1-201ENST00000404861 406 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 MTCYBP5-201ENST00000423752 1135 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 AC004941.2-201ENST00000427009 228 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 SNRPEP7-201ENST00000438350 220 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 CALM1P1-201ENST00000442082 433 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 MTND1P3-201ENST00000484956 952 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR449C-201ENST00000516047 92 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 RNA5SP458-201ENST00000516188 119 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 MTND4P16-201ENST00000466108 1367 ntBASIC0.44□□□□□ -2.34
TRAV13-1A0A0B4J241 RNU6-392P-201ENST00000364926 101 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR508-201ENST00000384857 115 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR605-201ENST00000385078 83 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 MIR92A1-201ENST00000385233 78 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 RPS3AP1-201ENST00000413190 320 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 CYCSP33-201ENST00000414485 327 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AC063976.4-201ENST00000421971 163 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AL591043.1-201ENST00000432461 424 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AL591212.2-201ENST00000433923 257 ntBASIC0.43□□□□□ -2.34
TRAV13-1A0A0B4J241 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms