Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 UBBP2-201ENST00000376781 231 ntBASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 AC011998.1-201ENST00000433403 117 ntBASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 AC103975.1-201ENST00000482506 483 ntBASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 RN7SL604P-201ENST00000492589 296 ntBASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 AIG1P1-201ENST00000503376 148 ntBASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 RNA5SP272-201ENST00000516095 111 ntBASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 AP001781.1-201ENST00000530977 207 ntBASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHB9Q9Y5E1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 RNU1-94P-201ENST00000362627 173 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 RNU6-454P-201ENST00000364292 107 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 RPS26P8-201ENST00000393490 348 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 MIR1271-201ENST00000408537 86 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 AL591419.1-201ENST00000427423 339 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 AC005300.1-201ENST00000428401 373 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 RPS26P2-201ENST00000440331 348 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 RN7SL303P-201ENST00000469773 251 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 RN7SKP164-201ENST00000516138 266 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 MIR3690-201ENST00000580266 75 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 AL162713.1-201ENST00000604480 262 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 AC010332.2-201ENST00000613083 1904 ntBASIC4.62□□□□□ -1.67
PCDHB9Q9Y5E1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 RNU6-324P-201ENST00000363957 106 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 RNU6-801P-201ENST00000364087 105 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 RNA5SP205-201ENST00000364653 136 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 Y_RNA.415-201ENST00000384012 112 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 SNORA37-201ENST00000384504 129 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 YPEL5P1-201ENST00000419731 367 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 RNU5F-2P-201ENST00000516066 82 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 RN7SKP289-201ENST00000517244 295 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 AC136628.3-201ENST00000521868 290 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 AC106785.1-201ENST00000565935 262 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 MIR3923-201ENST00000579521 83 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 MIR4431-201ENST00000579990 94 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 AC090616.3-201ENST00000582184 217 ntBASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PCDHB9Q9Y5E1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 RNU6-103P-201ENST00000363686 107 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 MIR134-201ENST00000385258 73 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 SNORA40-201ENST00000388090 126 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 CBX3P9-201ENST00000402326 552 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 RPS12P10-201ENST00000427031 377 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 AL135790.2-201ENST00000437701 267 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 RPL23AP93-201ENST00000440847 484 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 MIR4744-201ENST00000581563 82 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 MIR3138-201ENST00000585238 82 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 AC025946.2-201ENST00000603398 234 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 AC114781.5-201ENST00000615297 108 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 AC027290.2-201ENST00000623210 18662 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 AC139713.2-215ENST00000641428 5037 ntBASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms