Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC112206.3-201ENST00000514578 389 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 SNORA43.2-201ENST00000516652 128 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 AP003122.4-201ENST00000530980 758 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 MIR4769-201ENST00000584126 77 ntBASIC1.33□□□□□ -2.2
LRRC39Q96DD0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC39Q96DD0 RAP1BP3-201ENST00000407180 549 ntBASIC1.32□□□□□ -2.2
LRRC39Q96DD0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.32□□□□□ -2.2
LRRC39Q96DD0 MTND3P1-201ENST00000441336 220 ntBASIC1.32□□□□□ -2.2
LRRC39Q96DD0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC39Q96DD0 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
LRRC39Q96DD0 MTND2P33-201ENST00000506452 1031 ntBASIC1.32□□□□□ -2.2
LRRC39Q96DD0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC39Q96DD0 AC009646.1-201ENST00000510455 318 ntBASIC1.32□□□□□ -2.2
LRRC39Q96DD0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.32□□□□□ -2.2
LRRC39Q96DD0 Y_RNA.687-201ENST00000516558 91 ntBASIC1.32□□□□□ -2.2
LRRC39Q96DD0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC39Q96DD0 SNORA77B-201ENST00000578179 125 ntBASIC1.32□□□□□ -2.2
LRRC39Q96DD0 MIR4307-201ENST00000582802 84 ntBASIC1.32□□□□□ -2.2
LRRC39Q96DD0 MIR548AC-201ENST00000585049 88 ntBASIC1.32□□□□□ -2.2
LRRC39Q96DD0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.32□□□□□ -2.2
LRRC39Q96DD0 AP000560.1-201ENST00000624150 1937 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC073343.1-201ENST00000328239 651 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LRRC39Q96DD0 SNORD56.1-201ENST00000362913 68 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 RNU6-457P-201ENST00000363999 107 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 RNU4-68P-201ENST00000364314 141 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 SNORD114-6-201ENST00000364393 72 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.31□□□□□ -2.2
LRRC39Q96DD0 MTND1P32-201ENST00000433043 938 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC39Q96DD0 MTND2P4-201ENST00000445034 1004 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC130509.1-201ENST00000464158 433 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.31□□□□□ -2.2
LRRC39Q96DD0 RNU7-51P-201ENST00000516560 62 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AP003033.1-201ENST00000527244 415 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC005668.1-201ENST00000571142 476 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC091135.1-201ENST00000585943 307 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 MTND3P19-201ENST00000603825 345 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC121334.2-201ENST00000605387 271 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC021755.4-201ENST00000616620 456 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
LRRC39Q96DD0 AC245060.5-201ENST00000610778 3293 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 SNORD33-201ENST00000362761 85 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 RNU6-112P-201ENST00000363599 104 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 RPS3AP36-201ENST00000398190 775 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC39Q96DD0 FTH1P12-201ENST00000432137 551 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AC079448.1-201ENST00000449377 373 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.3□□□□□ -2.2
LRRC39Q96DD0 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AC105185.1-201ENST00000518705 535 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AC115990.1-201ENST00000526957 301 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AL161670.1-201ENST00000554348 137 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AC108747.1-201ENST00000609508 535 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 MIR8063-201ENST00000621930 81 ntBASIC1.3□□□□□ -2.2
LRRC39Q96DD0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
LRRC39Q96DD0 AC091812.1-201ENST00000432235 1948 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 U8.10-201ENST00000384260 133 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 RPL22P18-201ENST00000417197 377 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 AC139712.2-201ENST00000424302 339 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 AL135790.2-201ENST00000437701 267 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.29□□□□□ -2.2
LRRC39Q96DD0 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.29□□□□□ -2.2
LRRC39Q96DD0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.29□□□□□ -2.2
LRRC39Q96DD0 BNIP3P6-201ENST00000549284 499 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 MIR4303-201ENST00000581299 66 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 AC080013.3-201ENST00000606839 578 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 AC120349.3-201ENST00000624377 529 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 AL445523.1-201ENST00000451184 1362 ntBASIC1.29□□□□□ -2.2
LRRC39Q96DD0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
LRRC39Q96DD0 ICE2P2-201ENST00000483823 2787 ntBASIC1.28□□□□□ -2.2
LRRC39Q96DD0 SNORD1A-201ENST00000364968 72 ntBASIC1.28□□□□□ -2.2
LRRC39Q96DD0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.28□□□□□ -2.2
LRRC39Q96DD0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.28□□□□□ -2.2
LRRC39Q96DD0 AL589872.1-201ENST00000426602 288 ntBASIC1.28□□□□□ -2.2
LRRC39Q96DD0 UBE2V1P8-201ENST00000437166 265 ntBASIC1.28□□□□□ -2.2
LRRC39Q96DD0 HMGB1P31-201ENST00000437242 427 ntBASIC1.28□□□□□ -2.2
LRRC39Q96DD0 JTBP1-201ENST00000441314 247 ntBASIC1.28□□□□□ -2.2
LRRC39Q96DD0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.28□□□□□ -2.2
LRRC39Q96DD0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.28□□□□□ -2.2
LRRC39Q96DD0 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms