Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 U4.1-201ENST00000620349 87 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.68□□□□□ -1.82
KRT40Q6A162 MIR4272-201ENST00000635924 64 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 MIR7153-201ENST00000637758 57 ntBASIC3.68□□□□□ -1.82
KRT40Q6A162 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.68□□□□□ -1.82
KRT40Q6A162 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
KRT40Q6A162 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRT40Q6A162 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT40Q6A162 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KRT40Q6A162 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRT40Q6A162 RNY3P11-201ENST00000364153 102 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 RNU6-827P-201ENST00000365553 106 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 RNU6-805P-201ENST00000365643 106 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
KRT40Q6A162 RNU6-741P-201ENST00000383889 107 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 Y_RNA.389-201ENST00000383924 113 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 Y_RNA.401-201ENST00000383965 117 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 Y_RNA.512-201ENST00000384518 102 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 MIR10A-201ENST00000385043 110 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 DPH3P2-201ENST00000422618 250 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.67□□□□□ -1.82
KRT40Q6A162 RPL23AP45-201ENST00000476406 468 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.67□□□□□ -1.82
KRT40Q6A162 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.67□□□□□ -1.82
KRT40Q6A162 SNORA31.19-201ENST00000517079 126 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 RNA5SP165-201ENST00000517142 115 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.67□□□□□ -1.82
KRT40Q6A162 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.67□□□□□ -1.82
KRT40Q6A162 AC110588.1-201ENST00000559699 137 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 AC136601.2-201ENST00000604356 474 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 PRR13P7-201ENST00000605538 430 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.67□□□□□ -1.82
KRT40Q6A162 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT40Q6A162 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.66□□□□□ -1.82
KRT40Q6A162 ZNF72P-201ENST00000425869 1908 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KRT40Q6A162 Y_RNA.176-201ENST00000363815 109 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 RNU4-42P-201ENST00000364738 142 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 Y_RNA.533-201ENST00000384596 114 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 RNA5SP293-201ENST00000410527 113 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT40Q6A162 AL356867.1-201ENST00000429623 299 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 AL627311.1-201ENST00000431514 115 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 AL353705.1-201ENST00000433468 480 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.66□□□□□ -1.82
KRT40Q6A162 AC125238.1-201ENST00000448842 249 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT40Q6A162 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.66□□□□□ -1.82
KRT40Q6A162 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.66□□□□□ -1.82
KRT40Q6A162 ATP5F1P5-201ENST00000526403 760 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 TRAV28-201ENST00000557548 323 ntBASIC3.66□□□□□ -1.82
KRT40Q6A162 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.66□□□□□ -1.82
KRT40Q6A162 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.66□□□□□ -1.82
KRT40Q6A162 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KRT40Q6A162 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.65□□□□□ -1.82
KRT40Q6A162 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KRT40Q6A162 AC008669.1-201ENST00000565823 2178 ntBASIC3.65□□□□□ -1.82
KRT40Q6A162 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
KRT40Q6A162 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT40Q6A162 AP001148.1-201ENST00000624124 2359 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 RPL9P7-201ENST00000330965 580 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 Y_RNA.39-201ENST00000362620 98 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 RNY1P16-201ENST00000363063 111 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 Y_RNA.314-201ENST00000365114 102 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 Y_RNA.577-201ENST00000384794 101 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AL139095.1-201ENST00000404326 391 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 MIR1290-201ENST00000408735 78 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 RNU6-1156P-201ENST00000410365 100 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 RNU2-37P-201ENST00000410695 177 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.65□□□□□ -1.83
KRT40Q6A162 AC108059.2-201ENST00000434626 151 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AL513043.1-201ENST00000439124 535 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 RPL21P2-201ENST00000440049 481 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AC092798.1-201ENST00000458542 409 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.65□□□□□ -1.83
KRT40Q6A162 RPL9P9-202ENST00000466501 579 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 RN7SL283P-201ENST00000489055 303 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.65□□□□□ -1.83
KRT40Q6A162 MRPS35P2-201ENST00000508242 191 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.65□□□□□ -1.83
KRT40Q6A162 ACA59.1-201ENST00000515966 143 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AL161670.1-201ENST00000554348 137 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AC103996.1-201ENST00000555468 102 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 MIR5188-201ENST00000583467 113 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AC004805.2-201ENST00000605382 482 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AL161629.2-201ENST00000615347 275 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 AC007785.2-201ENST00000598627 1916 ntBASIC3.65□□□□□ -1.83
KRT40Q6A162 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
KRT40Q6A162 RNU6-238P-201ENST00000363313 106 ntBASIC3.64□□□□□ -1.83
KRT40Q6A162 RNU6-702P-201ENST00000364982 107 ntBASIC3.64□□□□□ -1.83
KRT40Q6A162 RNU6-1109P-201ENST00000391187 107 ntBASIC3.64□□□□□ -1.83
KRT40Q6A162 AL591034.2-201ENST00000402839 359 ntBASIC3.64□□□□□ -1.83
KRT40Q6A162 NUP35P1-201ENST00000422734 947 ntBASIC3.64□□□□□ -1.83
KRT40Q6A162 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT40Q6A162 AC013470.1-201ENST00000453438 462 ntBASIC3.64□□□□□ -1.83
KRT40Q6A162 RNU6-1037P-201ENST00000459571 107 ntBASIC3.64□□□□□ -1.83
KRT40Q6A162 RNU6-572P-201ENST00000516724 80 ntBASIC3.64□□□□□ -1.83
KRT40Q6A162 Y_RNA.721-201ENST00000517207 102 ntBASIC3.64□□□□□ -1.83
KRT40Q6A162 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms