Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL133475.1-201ENST00000404414 305 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 AC078809.1-201ENST00000427601 140 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 AL353997.1-201ENST00000432936 108 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 AL513124.1-201ENST00000450410 614 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 RPL21P10-201ENST00000463521 490 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.19□□□□□ -1.9
NKX6-1P78426 AC016632.1-201ENST00000503994 196 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 AC026784.1-201ENST00000507986 352 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 RAC1P5-201ENST00000512182 576 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
NKX6-1P78426 AC115990.1-201ENST00000526957 301 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.19□□□□□ -1.9
NKX6-1P78426 AC020661.2-201ENST00000560114 134 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 SUB1P3-201ENST00000564581 315 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX6-1P78426 MIR3171-201ENST00000584270 74 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 RPS15AP11-201ENST00000594193 385 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 SNRPGP17-201ENST00000603780 214 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 RMST_8.1-201ENST00000610287 165 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 Y_RNA.812-201ENST00000610788 101 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 Y_RNA.784-201ENST00000613803 101 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 Y_RNA.787-201ENST00000616522 101 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 Y_RNA.780-201ENST00000617336 101 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 Y_RNA.801-201ENST00000619005 101 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 AC099654.10-201ENST00000640395 161 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NKX6-1P78426 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX6-1P78426 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX6-1P78426 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX6-1P78426 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
NKX6-1P78426 AC233981.2-201ENST00000611524 1614 ntBASIC3.19□□□□□ -1.9
NKX6-1P78426 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
NKX6-1P78426 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NKX6-1P78426 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NKX6-1P78426 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX6-1P78426 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.18□□□□□ -1.9
NKX6-1P78426 AC007823.1-201ENST00000569932 1566 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX6-1P78426 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NKX6-1P78426 RNU6-1115P-201ENST00000362490 106 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 Y_RNA.112-201ENST00000363250 102 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 RNU6-595P-201ENST00000363944 107 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 Y_RNA.202-201ENST00000364083 110 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 SNORD32A-201ENST00000364805 84 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 RNU6-968P-201ENST00000384076 107 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 SNORA48.2-201ENST00000390926 124 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 RNU6-700P-201ENST00000391043 107 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX6-1P78426 RPL23AP95-201ENST00000426806 265 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AC099799.1-201ENST00000439809 192 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AP001324.2-201ENST00000461163 319 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AL049830.2-201ENST00000480072 201 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 Y_RNA.661-201ENST00000516003 99 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 SNORD116.3-201ENST00000517176 78 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AC016256.1-201ENST00000547971 354 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.18□□□□□ -1.9
NKX6-1P78426 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NKX6-1P78426 AL158827.2-201ENST00000602494 330 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX6-1P78426 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NKX6-1P78426 AL691447.3-201ENST00000635020 330 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AP000553.6-201ENST00000641242 118 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 AL732372.2-225ENST00000642124 456 ntBASIC3.18□□□□□ -1.9
NKX6-1P78426 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX6-1P78426 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX6-1P78426 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX6-1P78426 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NKX6-1P78426 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX6-1P78426 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX6-1P78426 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX6-1P78426 MTND5P30-201ENST00000452896 1731 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 MIR490-201ENST00000384865 128 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NKX6-1P78426 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.17□□□□□ -1.9
NKX6-1P78426 AC243428.1-201ENST00000421099 264 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.17□□□□□ -1.9
NKX6-1P78426 AC002075.2-201ENST00000425207 252 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX6-1P78426 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX6-1P78426 AL137792.2-201ENST00000443484 235 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AL035666.1-201ENST00000446195 348 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.17□□□□□ -1.9
NKX6-1P78426 AC079354.2-201ENST00000453523 154 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 RN7SKP210-201ENST00000459176 261 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.17□□□□□ -1.9
NKX6-1P78426 RN7SL330P-201ENST00000469709 307 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 RN7SL807P-201ENST00000470923 297 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 RPL22P13-201ENST00000493291 347 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.17□□□□□ -1.9
NKX6-1P78426 RN7SKP209-201ENST00000516888 304 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 RNU6-699P-201ENST00000517081 110 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AC109329.1-201ENST00000518744 317 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 RNU6-988P-201ENST00000519081 107 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AP003072.1-201ENST00000531740 145 ntBASIC3.17□□□□□ -1.9
NKX6-1P78426 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 284 ms