Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RPL21P28-201ENST00000401418 483 ntBASIC3.71□□□□□ -1.82
KLF4O43474 RN7SKP27-201ENST00000410684 333 ntBASIC3.71□□□□□ -1.82
KLF4O43474 RPS26P42-201ENST00000413485 326 ntBASIC3.71□□□□□ -1.82
KLF4O43474 AL356968.1-201ENST00000416622 474 ntBASIC3.71□□□□□ -1.82
KLF4O43474 AL590556.1-201ENST00000423231 483 ntBASIC3.71□□□□□ -1.82
KLF4O43474 COX6B1P7-201ENST00000430845 235 ntBASIC3.71□□□□□ -1.82
KLF4O43474 Z98742.2-201ENST00000431564 187 ntBASIC3.71□□□□□ -1.82
KLF4O43474 RPL23AP46-201ENST00000438548 490 ntBASIC3.71□□□□□ -1.82
KLF4O43474 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.71□□□□□ -1.82
KLF4O43474 AL136097.1-201ENST00000456945 913 ntBASIC3.71□□□□□ -1.82
KLF4O43474 RPL21P11-201ENST00000461458 483 ntBASIC3.71□□□□□ -1.82
KLF4O43474 RPL21P39-201ENST00000463605 483 ntBASIC3.71□□□□□ -1.82
KLF4O43474 AC087190.1-201ENST00000484462 480 ntBASIC3.71□□□□□ -1.82
KLF4O43474 AC107032.1-201ENST00000485945 480 ntBASIC3.71□□□□□ -1.82
KLF4O43474 AC132942.1-201ENST00000486753 483 ntBASIC3.71□□□□□ -1.82
KLF4O43474 AF213884.1-201ENST00000488102 463 ntBASIC3.71□□□□□ -1.82
KLF4O43474 AC093591.1-201ENST00000491435 481 ntBASIC3.71□□□□□ -1.82
KLF4O43474 RPL21P16-201ENST00000495531 483 ntBASIC3.71□□□□□ -1.82
KLF4O43474 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.71□□□□□ -1.82
KLF4O43474 RNU5F-2P-201ENST00000516066 82 ntBASIC3.71□□□□□ -1.82
KLF4O43474 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.71□□□□□ -1.82
KLF4O43474 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.71□□□□□ -1.82
KLF4O43474 AL049781.1-201ENST00000623195 3585 ntBASIC3.71□□□□□ -1.82
KLF4O43474 AC110774.1-201ENST00000623567 2018 ntBASIC3.71□□□□□ -1.82
KLF4O43474 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
KLF4O43474 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.71□□□□□ -1.82
KLF4O43474 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KLF4O43474 MAPK10-322ENST00000641485 4530 ntBASIC3.71□□□□□ -1.82
KLF4O43474 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
KLF4O43474 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KLF4O43474 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KLF4O43474 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
KLF4O43474 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KLF4O43474 MIR372-201ENST00000362225 67 ntBASIC3.7□□□□□ -1.82
KLF4O43474 RNU6-529P-201ENST00000363383 104 ntBASIC3.7□□□□□ -1.82
KLF4O43474 RNA5SP283-201ENST00000365604 119 ntBASIC3.7□□□□□ -1.82
KLF4O43474 SNORA36A-201ENST00000384221 132 ntBASIC3.7□□□□□ -1.82
KLF4O43474 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.7□□□□□ -1.82
KLF4O43474 RN7SL271P-201ENST00000487601 295 ntBASIC3.7□□□□□ -1.82
KLF4O43474 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.7□□□□□ -1.82
KLF4O43474 RNU6-1114P-201ENST00000516022 107 ntBASIC3.7□□□□□ -1.82
KLF4O43474 Y_RNA.713-201ENST00000517013 96 ntBASIC3.7□□□□□ -1.82
KLF4O43474 SCARNA11.3-201ENST00000517276 130 ntBASIC3.7□□□□□ -1.82
KLF4O43474 AC022868.1-201ENST00000517767 391 ntBASIC3.7□□□□□ -1.82
KLF4O43474 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.7□□□□□ -1.82
KLF4O43474 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.7□□□□□ -1.82
KLF4O43474 AC007458.1-201ENST00000542812 373 ntBASIC3.7□□□□□ -1.82
KLF4O43474 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.7□□□□□ -1.82
KLF4O43474 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.7□□□□□ -1.82
KLF4O43474 AL162713.1-201ENST00000604480 262 ntBASIC3.7□□□□□ -1.82
KLF4O43474 AL034555.1-201ENST00000604816 211 ntBASIC3.7□□□□□ -1.82
KLF4O43474 AL670379.2-201ENST00000604983 252 ntBASIC3.7□□□□□ -1.82
KLF4O43474 HMGB1P50-201ENST00000605814 607 ntBASIC3.7□□□□□ -1.82
KLF4O43474 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.7□□□□□ -1.82
KLF4O43474 AL450472.1-202ENST00000637286 180 ntBASIC3.7□□□□□ -1.82
KLF4O43474 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.7□□□□□ -1.82
KLF4O43474 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
KLF4O43474 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KLF4O43474 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KLF4O43474 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
KLF4O43474 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KLF4O43474 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KLF4O43474 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KLF4O43474 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.69□□□□□ -1.82
KLF4O43474 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KLF4O43474 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KLF4O43474 RNU6-486P-201ENST00000363116 107 ntBASIC3.69□□□□□ -1.82
KLF4O43474 Y_RNA.153-201ENST00000363615 91 ntBASIC3.69□□□□□ -1.82
KLF4O43474 RNU6-280P-201ENST00000364145 104 ntBASIC3.69□□□□□ -1.82
KLF4O43474 RNU6-463P-201ENST00000384340 107 ntBASIC3.69□□□□□ -1.82
KLF4O43474 MIR134-201ENST00000385258 73 ntBASIC3.69□□□□□ -1.82
KLF4O43474 HMGB3P2-201ENST00000411913 584 ntBASIC3.69□□□□□ -1.82
KLF4O43474 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.69□□□□□ -1.82
KLF4O43474 U8.20-201ENST00000459445 131 ntBASIC3.69□□□□□ -1.82
KLF4O43474 MTATP8P1-201ENST00000467115 207 ntBASIC3.69□□□□□ -1.82
KLF4O43474 MRPS35P2-201ENST00000508242 191 ntBASIC3.69□□□□□ -1.82
KLF4O43474 MRPS36P2-201ENST00000512569 299 ntBASIC3.69□□□□□ -1.82
KLF4O43474 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.69□□□□□ -1.82
KLF4O43474 MTCO2P24-201ENST00000515611 426 ntBASIC3.69□□□□□ -1.82
KLF4O43474 RNU6-635P-201ENST00000516651 102 ntBASIC3.69□□□□□ -1.82
KLF4O43474 SNORA31.16-201ENST00000516773 139 ntBASIC3.69□□□□□ -1.82
KLF4O43474 AC131281.1-201ENST00000522984 164 ntBASIC3.69□□□□□ -1.82
KLF4O43474 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.69□□□□□ -1.82
KLF4O43474 HSPE1P20-201ENST00000538133 289 ntBASIC3.69□□□□□ -1.82
KLF4O43474 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.69□□□□□ -1.82
KLF4O43474 MIR5684-201ENST00000585074 65 ntBASIC3.69□□□□□ -1.82
KLF4O43474 SNORA51-201ENST00000606420 132 ntBASIC3.69□□□□□ -1.82
KLF4O43474 7SK.10-201ENST00000621414 298 ntBASIC3.69□□□□□ -1.82
KLF4O43474 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.69□□□□□ -1.82
KLF4O43474 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.69□□□□□ -1.82
KLF4O43474 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KLF4O43474 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KLF4O43474 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KLF4O43474 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.68□□□□□ -1.82
KLF4O43474 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KLF4O43474 RNY3P4-201ENST00000384428 101 ntBASIC3.68□□□□□ -1.82
KLF4O43474 RNU1-139P-201ENST00000391307 165 ntBASIC3.68□□□□□ -1.82
KLF4O43474 MIR208B-201ENST00000401172 77 ntBASIC3.68□□□□□ -1.82
KLF4O43474 MIR548F4-201ENST00000408515 105 ntBASIC3.68□□□□□ -1.82
KLF4O43474 RNU6-628P-201ENST00000410675 107 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 228.8 ms