Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC136619.2-201ENST00000563361 631 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 MYL12BP1-201ENST00000569826 507 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RPS15AP11-201ENST00000594193 385 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 RMST_4.1-201ENST00000616886 107 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 AL158209.2-201ENST00000619266 216 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 OR5AK4P-201ENST00000635912 903 ntBASIC2.23□□□□□ -2.05
ATG4BQ9Y4P1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 RNA5SP289-201ENST00000362332 137 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 RNU4-40P-201ENST00000364351 143 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 SNORD114-30-201ENST00000364448 72 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 Y_RNA.409-201ENST00000383990 98 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 RAP1BP3-201ENST00000407180 549 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 CYCSP48-201ENST00000417124 323 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC010975.2-201ENST00000427781 588 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AL356010.1-201ENST00000456364 102 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 CYP2C59P-201ENST00000457790 269 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AF213884.2-201ENST00000510417 903 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC104136.1-201ENST00000512969 394 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC105417.1-201ENST00000514691 285 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 SMURF2P1-201ENST00000514992 481 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 RN7SKP219-201ENST00000516825 296 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC027807.1-201ENST00000559921 996 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC012507.3-201ENST00000603556 477 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AL136363.2-201ENST00000604173 851 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AL354950.2-201ENST00000617939 290 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC026585.1-201ENST00000619582 524 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 MIR5739-201ENST00000619803 80 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 MIR6863-201ENST00000636112 90 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 MTND4P14-201ENST00000435799 1354 ntBASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-552P-201ENST00000362869 119 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 SNORD114-19-201ENST00000363072 75 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-996P-201ENST00000365438 107 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 MIR95-201ENST00000385072 81 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 SNORD70.1-201ENST00000391007 85 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 RNU2-29P-201ENST00000410423 189 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 RNU2-63P-201ENST00000410792 194 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AL669831.1-202ENST00000428504 417 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 HMGB1P31-201ENST00000437242 427 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 GTF2IP13-201ENST00000438487 386 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 RPL7P12-201ENST00000446719 750 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 SNRPFP3-201ENST00000457792 225 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 SCARNA18-201ENST00000459004 134 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 GMFBP1-201ENST00000467831 427 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AC107222.1-201ENST00000510899 637 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AC008413.1-201ENST00000511864 177 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AP005435.4-201ENST00000529514 284 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 PSMA3P-201ENST00000555485 635 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AGGF1P4-201ENST00000568249 801 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 BNIP3P30-201ENST00000601184 574 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AL590808.1-201ENST00000618696 141 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AL031601.2-202ENST00000622650 282 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 AC139792.3-201ENST00000623525 224 ntBASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
ATG4BQ9Y4P1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 SNORA67.1-201ENST00000364749 141 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNA5SP125-201ENST00000364843 120 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-517P-201ENST00000384362 110 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-393P-201ENST00000384475 107 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 SNORD116-20-201ENST00000384529 92 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-1158P-201ENST00000391167 107 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-903P-201ENST00000391270 109 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNU2-3P-201ENST00000410144 191 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-607P-201ENST00000411283 108 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AC138623.1-201ENST00000418060 216 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 EIF4EP4-201ENST00000424916 578 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AL606489.2-201ENST00000433886 234 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RPS15AP28-201ENST00000435088 386 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 PRPS1P1-201ENST00000445305 876 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms