Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 HMGB1P30-201ENST00000492455 606 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 MTCYBP18-201ENST00000501056 747 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.55□□□□□ -2
LYSMD4Q5XG99 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.55□□□□□ -2
LYSMD4Q5XG99 AC104136.1-201ENST00000512969 394 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.55□□□□□ -2
LYSMD4Q5XG99 RNU1-86P-201ENST00000516108 154 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 RNU1-107P-201ENST00000516617 154 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.55□□□□□ -2
LYSMD4Q5XG99 AL137161.1-201ENST00000532231 390 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 AC243972.3-201ENST00000539655 198 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.55□□□□□ -2
LYSMD4Q5XG99 SNORA59B-202ENST00000578183 701 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.55□□□□□ -2
LYSMD4Q5XG99 AC091152.3-201ENST00000604227 325 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 AC087045.1-201ENST00000605856 382 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 AC004520.1-201ENST00000608362 1413 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.55□□□□□ -2
LYSMD4Q5XG99 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.55□□□□□ -2
LYSMD4Q5XG99 OR4G1P-203ENST00000641984 1631 ntBASIC2.55□□□□□ -2
LYSMD4Q5XG99 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
LYSMD4Q5XG99 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.55□□□□□ -2
LYSMD4Q5XG99 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.54□□□□□ -2
LYSMD4Q5XG99 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
LYSMD4Q5XG99 MTND4P14-201ENST00000435799 1354 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
LYSMD4Q5XG99 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LYSMD4Q5XG99 RNU6-19P-201ENST00000384718 107 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.54□□□□□ -2
LYSMD4Q5XG99 RPL21P3-201ENST00000395517 478 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AL513475.1-201ENST00000406602 315 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AC016831.2-201ENST00000417179 352 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 HMGB1P31-201ENST00000437242 427 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.54□□□□□ -2
LYSMD4Q5XG99 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.54□□□□□ -2
LYSMD4Q5XG99 HIGD1AP2-201ENST00000446367 280 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AL353705.4-201ENST00000449661 238 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AC146507.2-201ENST00000460608 476 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AC087884.1-201ENST00000469738 328 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AC107626.1-201ENST00000471084 183 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 GZMAP1-201ENST00000503054 631 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AC116655.1-201ENST00000508324 901 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 RNU2-69P-201ENST00000516061 100 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 SCARNA11.3-201ENST00000517276 130 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 IGKV3-31-201ENST00000523109 329 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 MTND4P7-201ENST00000523876 130 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 HSPE1P20-201ENST00000538133 289 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.54□□□□□ -2
LYSMD4Q5XG99 AC090616.3-201ENST00000582184 217 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 MIR4801-201ENST00000582704 82 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.54□□□□□ -2
LYSMD4Q5XG99 RNU6-89P-201ENST00000606519 100 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 AC005046.1-201ENST00000608515 625 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 DISC2.1-201ENST00000612827 205 ntBASIC2.54□□□□□ -2
LYSMD4Q5XG99 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LYSMD4Q5XG99 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.54□□□□□ -2
LYSMD4Q5XG99 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.54□□□□□ -2
LYSMD4Q5XG99 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LYSMD4Q5XG99 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LYSMD4Q5XG99 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LYSMD4Q5XG99 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 RNU6-384P-201ENST00000364900 104 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 SNORA51.4-201ENST00000364993 124 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LYSMD4Q5XG99 RNU6-393P-201ENST00000384475 107 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 MIR518C-201ENST00000384822 101 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LYSMD4Q5XG99 RNU6-1148P-201ENST00000410992 104 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 BX682237.1-201ENST00000415016 335 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 AL353621.1-201ENST00000418219 243 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 BX276092.3-201ENST00000424182 230 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 PTGES3P4-201ENST00000426243 356 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 RPS29P6-201ENST00000438196 145 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 snoU109.2-201ENST00000459316 135 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 Y_RNA.638-201ENST00000459374 113 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 RN7SL75P-201ENST00000461926 281 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 RNU5F-8P-201ENST00000515941 111 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 MIR892C-201ENST00000516410 77 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 RN7SKP40-201ENST00000517211 242 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 MIR3117-201ENST00000584034 78 ntBASIC2.53□□□□□ -2
LYSMD4Q5XG99 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.53□□□□□ -2
LYSMD4Q5XG99 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LYSMD4Q5XG99 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
LYSMD4Q5XG99 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.52□□□□□ -2.01
LYSMD4Q5XG99 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.52□□□□□ -2.01
LYSMD4Q5XG99 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.52□□□□□ -2.01
LYSMD4Q5XG99 Y_RNA.167-201ENST00000363735 109 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms