Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RN7SL738P-201ENST00000470264 297 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 PPBPP1-201ENST00000510807 373 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 RNU5F-8P-201ENST00000515941 111 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 RNA5SP54-201ENST00000516951 92 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.37□□□□□ -1.71
NFKB1P19838 CR383656.8-201ENST00000549046 145 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.37□□□□□ -1.71
NFKB1P19838 MIR4330-201ENST00000579077 105 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 AL008718.3-201ENST00000610217 321 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 FTX_3.1-201ENST00000610451 147 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 MIR6134-201ENST00000617606 109 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 AC092628.2-201ENST00000622492 339 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.37□□□□□ -1.71
NFKB1P19838 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NFKB1P19838 SRP72P2-201ENST00000344851 1979 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.36□□□□□ -1.71
NFKB1P19838 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.36□□□□□ -1.71
NFKB1P19838 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NFKB1P19838 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NFKB1P19838 RNU5F-3P-201ENST00000363767 117 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 RNU4-84P-201ENST00000364200 139 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 Y_RNA.238-201ENST00000364441 102 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 RNU1-100P-201ENST00000365255 165 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
NFKB1P19838 Y_RNA.412-201ENST00000384001 104 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 RNU6-217P-201ENST00000384164 104 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 FAR2P2-201ENST00000413041 594 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 AC112220.1-201ENST00000434628 355 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 HLA-N-201ENST00000437516 135 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.36□□□□□ -1.71
NFKB1P19838 RPL7AP28-201ENST00000464513 571 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 SNRPGP7-201ENST00000469016 106 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 RN7SL459P-201ENST00000481078 302 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 RN7SL810P-201ENST00000493031 276 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 CYCSP23-201ENST00000519781 313 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NFKB1P19838 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NFKB1P19838 TRAV8-5-201ENST00000537369 341 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 AC006064.5-201ENST00000541782 248 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 MIR3145-201ENST00000580727 82 ntBASIC4.36□□□□□ -1.71
NFKB1P19838 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.36□□□□□ -1.71
NFKB1P19838 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.36□□□□□ -1.71
NFKB1P19838 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NFKB1P19838 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NFKB1P19838 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NFKB1P19838 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NFKB1P19838 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.35□□□□□ -1.71
NFKB1P19838 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NFKB1P19838 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.35□□□□□ -1.71
NFKB1P19838 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
NFKB1P19838 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.35□□□□□ -1.71
NFKB1P19838 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NFKB1P19838 Y_RNA.75-201ENST00000362927 97 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 Y_RNA.121-201ENST00000363309 113 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 RNU1-73P-201ENST00000383971 164 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 MIR544A-201ENST00000384855 91 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 MIR186-201ENST00000384988 86 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.35□□□□□ -1.71
NFKB1P19838 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.35□□□□□ -1.71
NFKB1P19838 RPS26P42-201ENST00000413485 326 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 AL157831.1-201ENST00000426134 473 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 AL732292.1-201ENST00000426692 226 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 RPL37P4-201ENST00000448908 268 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 snoU13.6-201ENST00000458785 104 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 RNU6-625P-201ENST00000459412 107 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 RPS27AP9-201ENST00000477681 438 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.35□□□□□ -1.71
NFKB1P19838 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.35□□□□□ -1.71
NFKB1P19838 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.35□□□□□ -1.71
NFKB1P19838 RN7SKP122-201ENST00000515923 296 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 RNU6-426P-201ENST00000516464 97 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 SNORD116-25-201ENST00000516517 92 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.35□□□□□ -1.71
NFKB1P19838 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.35□□□□□ -1.71
NFKB1P19838 MIR6820-201ENST00000611508 62 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 AC023043.4-201ENST00000612081 449 ntBASIC4.35□□□□□ -1.71
NFKB1P19838 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.35□□□□□ -1.71
NFKB1P19838 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.35□□□□□ -1.71
NFKB1P19838 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NFKB1P19838 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NFKB1P19838 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NFKB1P19838 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NFKB1P19838 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NFKB1P19838 AC092268.1-201ENST00000342691 405 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 Y_RNA.101-201ENST00000363154 102 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 HMGN2P30-201ENST00000423237 256 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.34□□□□□ -1.71
NFKB1P19838 RPS29P17-201ENST00000430795 166 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 AP000705.1-201ENST00000454567 350 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.34□□□□□ -1.71
NFKB1P19838 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.34□□□□□ -1.71
NFKB1P19838 AC018448.1-201ENST00000552843 316 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.34□□□□□ -1.71
NFKB1P19838 AC021231.3-201ENST00000558497 370 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 CYP4A43P-201ENST00000568156 121 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.34□□□□□ -1.71
NFKB1P19838 AC008745.1-201ENST00000604064 271 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 AC092593.1-201ENST00000515413 1815 ntBASIC4.34□□□□□ -1.71
NFKB1P19838 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms