Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPHS1O60500 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPHS1O60500 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPHS1O60500 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
NPHS1O60500 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NPHS1O60500 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NPHS1O60500 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPHS1O60500 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NPHS1O60500 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHS1O60500 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPHS1O60500 SNORD32A-201ENST00000364805 84 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 RNU1-140P-201ENST00000365040 165 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 RNU6-209P-201ENST00000384118 107 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 FTH1P15-201ENST00000406984 280 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 MIR548H3-201ENST00000408771 118 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 RNU6-1245P-201ENST00000411130 106 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 EIF1AXP1-201ENST00000419267 435 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 AL590135.1-201ENST00000422215 156 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.75□□□□□ -1.81
NPHS1O60500 AC007389.2-201ENST00000434630 306 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 TBCAP1-201ENST00000436520 327 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 AC004383.1-201ENST00000438135 289 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.75□□□□□ -1.81
NPHS1O60500 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHS1O60500 AC125238.1-201ENST00000448842 249 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 CEACAMP4-201ENST00000457676 421 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 RPS27AP10-201ENST00000496103 208 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.75□□□□□ -1.81
NPHS1O60500 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.75□□□□□ -1.81
NPHS1O60500 MIR4277-201ENST00000578298 84 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 MIR4700-201ENST00000578311 74 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 AC091903.1-201ENST00000624322 454 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHS1O60500 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
NPHS1O60500 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.75□□□□□ -1.81
NPHS1O60500 AC006504.1-201ENST00000562493 3666 ntBASIC3.75□□□□□ -1.81
NPHS1O60500 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
NPHS1O60500 HSPA8P1-201ENST00000425843 1833 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.74□□□□□ -1.81
NPHS1O60500 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.74□□□□□ -1.81
NPHS1O60500 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NPHS1O60500 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPHS1O60500 MIR335-201ENST00000362173 94 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 Y_RNA.16-201ENST00000362421 102 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 Y_RNA.539-201ENST00000384635 107 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 MRPL35P1-201ENST00000404272 572 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPHS1O60500 AC074117.2-201ENST00000417130 397 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.74□□□□□ -1.81
NPHS1O60500 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 AL691449.1-201ENST00000426570 421 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHS1O60500 AC087477.1-201ENST00000465747 340 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 SNRPGP3-201ENST00000469405 227 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 RNU6-138P-201ENST00000515952 107 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.74□□□□□ -1.81
NPHS1O60500 MIR4284-201ENST00000578924 81 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 MIR4659A-201ENST00000580269 81 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 MIR3138-201ENST00000585238 82 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 AL451007.1-201ENST00000595491 289 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 AC012531.5-201ENST00000611375 151 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 RMST_6.1-201ENST00000611980 203 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 AL110115.1-201ENST00000614396 364 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 AC024581.2-201ENST00000619986 252 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPHS1O60500 AC022336.2-201ENST00000568966 2538 ntBASIC3.74□□□□□ -1.81
NPHS1O60500 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPHS1O60500 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPHS1O60500 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.73□□□□□ -1.81
NPHS1O60500 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPHS1O60500 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPHS1O60500 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPHS1O60500 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
NPHS1O60500 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPHS1O60500 RNU6-858P-201ENST00000362436 107 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 RNU6-270P-201ENST00000364131 105 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHS1O60500 RNU6-338P-201ENST00000383888 105 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 SNORA29-201ENST00000384183 140 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 RNU6-937P-201ENST00000384325 106 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 RNU6-843P-201ENST00000384454 104 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 RNU6-1035P-201ENST00000384477 107 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 RNU4-70P-201ENST00000384579 139 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 SNORD78.2-201ENST00000391076 69 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 RPL21P17-201ENST00000397467 475 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 AL603908.1-201ENST00000406098 201 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHS1O60500 RPL18P10-201ENST00000425606 538 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 MTND5P15-201ENST00000434246 349 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 AC007969.2-201ENST00000441891 191 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 AC016700.2-201ENST00000446011 156 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 AL139109.1-201ENST00000455491 297 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 HMGN2P16-201ENST00000456802 261 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 RPS23P7-201ENST00000466210 444 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 SNRPGP7-201ENST00000469016 106 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 MRPL42P6-201ENST00000486397 371 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.73□□□□□ -1.81
NPHS1O60500 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.73□□□□□ -1.81
NPHS1O60500 RNU6-1338P-201ENST00000516328 91 ntBASIC3.73□□□□□ -1.81
NPHS1O60500 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms