Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 Y_RNA.481-201ENST00000384373 102 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 AL445529.1-201ENST00000398713 389 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 MTND4P25-201ENST00000441039 533 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 DDX3P2-201ENST00000446138 111 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 MTND1P18-201ENST00000448191 573 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.19□□□□□ -2.06
HDAC3O15379 AL109933.2-201ENST00000452651 260 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 CECR9-201ENST00000453421 199 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.19□□□□□ -2.06
HDAC3O15379 AC090515.1-201ENST00000465295 476 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 GMFBP1-201ENST00000467831 427 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.19□□□□□ -2.06
HDAC3O15379 AC104806.1-201ENST00000508720 308 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 AC074344.1-201ENST00000512823 224 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 RNU6-1178P-201ENST00000516674 107 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 RNU6-928P-201ENST00000516876 104 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 RNA5SP290-201ENST00000517133 127 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 SCARNA11.3-201ENST00000517276 130 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.19□□□□□ -2.06
HDAC3O15379 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.19□□□□□ -2.06
HDAC3O15379 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.19□□□□□ -2.06
HDAC3O15379 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.19□□□□□ -2.06
HDAC3O15379 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.19□□□□□ -2.06
HDAC3O15379 MIR548S-201ENST00000581352 82 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 AC078899.2-201ENST00000595282 212 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 AL121917.1-203ENST00000605534 577 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.19□□□□□ -2.06
HDAC3O15379 AC046143.2-201ENST00000609789 160 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 MIR6852-201ENST00000621699 66 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 DUXAP9-208ENST00000622815 614 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.19□□□□□ -2.06
HDAC3O15379 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.19□□□□□ -2.06
HDAC3O15379 Z99571.1-201ENST00000636677 394 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 MIR7515-201ENST00000637837 67 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HDAC3O15379 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HDAC3O15379 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HDAC3O15379 FTLP6-201ENST00000355274 422 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 SNORA3A-201ENST00000364113 130 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 Y_RNA.255-201ENST00000364581 97 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 SNORA4.3-201ENST00000365564 137 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 RNU6-877P-201ENST00000383868 107 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 MIR196B-201ENST00000384852 84 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 RNU6-903P-201ENST00000391270 109 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HDAC3O15379 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.18□□□□□ -2.06
HDAC3O15379 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.18□□□□□ -2.06
HDAC3O15379 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.18□□□□□ -2.06
HDAC3O15379 AC092047.1-201ENST00000424997 240 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 AL590383.1-201ENST00000428602 75 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 HMGB1P27-201ENST00000431429 603 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 SEPT14P3-201ENST00000439401 183 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 AL732372.2-207ENST00000445840 183 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.18□□□□□ -2.06
HDAC3O15379 SEPT14P2-201ENST00000453405 183 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 RPL12P25-201ENST00000455592 494 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 RPS3P1-201ENST00000456781 192 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.18□□□□□ -2.06
HDAC3O15379 AL163973.1-201ENST00000484753 577 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 RPL39P36-201ENST00000490784 156 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 MTCYBP18-201ENST00000501056 747 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 PRDX4P1-201ENST00000507189 574 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 CCDC34P1-201ENST00000507441 517 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.18□□□□□ -2.06
HDAC3O15379 SEPT14P4-201ENST00000513445 186 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 RNU6-358P-201ENST00000516564 75 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 FO082796.1-201ENST00000523795 183 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.18□□□□□ -2.06
HDAC3O15379 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 AC060780.3-201ENST00000589464 80 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 MIR6817-201ENST00000615588 66 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.18□□□□□ -2.06
HDAC3O15379 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.18□□□□□ -2.06
HDAC3O15379 AC099654.14-201ENST00000638599 341 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 CASC19-280ENST00000642102 1351 ntBASIC2.18□□□□□ -2.06
HDAC3O15379 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.18□□□□□ -2.06
HDAC3O15379 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
HDAC3O15379 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
HDAC3O15379 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.17□□□□□ -2.06
HDAC3O15379 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HDAC3O15379 RNA5SP68-201ENST00000363885 119 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 Y_RNA.245-201ENST00000364493 95 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 RNU6-116P-201ENST00000384042 109 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 RNU6-217P-201ENST00000384164 104 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 OR6C66P-201ENST00000414917 930 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 AL160275.3-201ENST00000423876 471 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 RPL36AP53-201ENST00000432891 316 ntBASIC2.17□□□□□ -2.06
HDAC3O15379 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.17□□□□□ -2.06
HDAC3O15379 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.17□□□□□ -2.06
HDAC3O15379 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.17□□□□□ -2.06
HDAC3O15379 AC104058.1-201ENST00000448028 297 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms