Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 ELOCP4-201ENST00000420090 333 ntBASIC1.88□□□□□ -2.11
AIF1P55008 AL589872.1-201ENST00000426602 288 ntBASIC1.88□□□□□ -2.11
AIF1P55008 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.88□□□□□ -2.11
AIF1P55008 AL451074.3-201ENST00000437709 472 ntBASIC1.88□□□□□ -2.11
AIF1P55008 MTND2P29-201ENST00000438595 412 ntBASIC1.88□□□□□ -2.11
AIF1P55008 AC245102.2-201ENST00000448956 180 ntBASIC1.88□□□□□ -2.11
AIF1P55008 RPL23AP42-201ENST00000471152 471 ntBASIC1.88□□□□□ -2.11
AIF1P55008 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
AIF1P55008 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.88□□□□□ -2.11
AIF1P55008 RN7SKP256-201ENST00000517201 314 ntBASIC1.88□□□□□ -2.11
AIF1P55008 MRPS36P3-201ENST00000519284 130 ntBASIC1.88□□□□□ -2.11
AIF1P55008 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.88□□□□□ -2.11
AIF1P55008 CYCSP27-201ENST00000527643 293 ntBASIC1.88□□□□□ -2.11
AIF1P55008 OR5AL2P-201ENST00000532185 920 ntBASIC1.88□□□□□ -2.11
AIF1P55008 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
AIF1P55008 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.88□□□□□ -2.11
AIF1P55008 AL670379.2-201ENST00000604983 252 ntBASIC1.88□□□□□ -2.11
AIF1P55008 AL670379.4-201ENST00000605279 254 ntBASIC1.88□□□□□ -2.11
AIF1P55008 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.88□□□□□ -2.11
AIF1P55008 AC068787.1-201ENST00000623908 691 ntBASIC1.88□□□□□ -2.11
AIF1P55008 AC090517.3-201ENST00000625170 141 ntBASIC1.88□□□□□ -2.11
AIF1P55008 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.88□□□□□ -2.11
AIF1P55008 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
AIF1P55008 RNU6-546P-201ENST00000383991 107 ntBASIC1.87□□□□□ -2.11
AIF1P55008 SNORA24.1-201ENST00000384401 135 ntBASIC1.87□□□□□ -2.11
AIF1P55008 U8.13-201ENST00000390842 128 ntBASIC1.87□□□□□ -2.11
AIF1P55008 MIR1294-201ENST00000408503 142 ntBASIC1.87□□□□□ -2.11
AIF1P55008 RNU2-32P-201ENST00000411193 191 ntBASIC1.87□□□□□ -2.11
AIF1P55008 AL031779.1-201ENST00000415663 330 ntBASIC1.87□□□□□ -2.11
AIF1P55008 OOSP1P1-201ENST00000423265 274 ntBASIC1.87□□□□□ -2.11
AIF1P55008 AC007283.2-201ENST00000424739 197 ntBASIC1.87□□□□□ -2.11
AIF1P55008 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
AIF1P55008 USP9YP18-201ENST00000425912 695 ntBASIC1.87□□□□□ -2.11
AIF1P55008 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.87□□□□□ -2.11
AIF1P55008 RPL7P54-201ENST00000438336 674 ntBASIC1.87□□□□□ -2.11
AIF1P55008 AL513124.1-201ENST00000450410 614 ntBASIC1.87□□□□□ -2.11
AIF1P55008 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.87□□□□□ -2.11
AIF1P55008 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.87□□□□□ -2.11
AIF1P55008 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.87□□□□□ -2.11
AIF1P55008 AC117532.1-201ENST00000514638 323 ntBASIC1.87□□□□□ -2.11
AIF1P55008 Y_RNA.687-201ENST00000516558 91 ntBASIC1.87□□□□□ -2.11
AIF1P55008 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.87□□□□□ -2.11
AIF1P55008 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.87□□□□□ -2.11
AIF1P55008 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.87□□□□□ -2.11
AIF1P55008 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.87□□□□□ -2.11
AIF1P55008 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
AIF1P55008 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.87□□□□□ -2.11
AIF1P55008 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.87□□□□□ -2.11
AIF1P55008 AC027807.2-201ENST00000616099 408 ntBASIC1.87□□□□□ -2.11
AIF1P55008 AC108479.2-201ENST00000617314 601 ntBASIC1.87□□□□□ -2.11
AIF1P55008 AC007792.1-201ENST00000623023 402 ntBASIC1.87□□□□□ -2.11
AIF1P55008 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
AIF1P55008 AC002543.1-201ENST00000299783 1954 ntBASIC1.87□□□□□ -2.11
AIF1P55008 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
AIF1P55008 RNU6-384P-201ENST00000364900 104 ntBASIC1.86□□□□□ -2.11
AIF1P55008 RNU6-1274P-201ENST00000384557 107 ntBASIC1.86□□□□□ -2.11
AIF1P55008 MIR578-201ENST00000384828 96 ntBASIC1.86□□□□□ -2.11
AIF1P55008 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
AIF1P55008 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
AIF1P55008 RNA5SP212-201ENST00000391223 107 ntBASIC1.86□□□□□ -2.11
AIF1P55008 RNU2-8P-201ENST00000410727 190 ntBASIC1.86□□□□□ -2.11
AIF1P55008 AC244636.1-201ENST00000421152 228 ntBASIC1.86□□□□□ -2.11
AIF1P55008 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.86□□□□□ -2.11
AIF1P55008 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.86□□□□□ -2.11
AIF1P55008 snoU13.15-201ENST00000459407 104 ntBASIC1.86□□□□□ -2.11
AIF1P55008 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.86□□□□□ -2.11
AIF1P55008 SNORA43.2-201ENST00000516652 128 ntBASIC1.86□□□□□ -2.11
AIF1P55008 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.86□□□□□ -2.11
AIF1P55008 AP003392.2-201ENST00000527269 208 ntBASIC1.86□□□□□ -2.11
AIF1P55008 AC022878.1-201ENST00000530684 149 ntBASIC1.86□□□□□ -2.11
AIF1P55008 AC022616.8-201ENST00000533569 253 ntBASIC1.86□□□□□ -2.11
AIF1P55008 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.86□□□□□ -2.11
AIF1P55008 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.86□□□□□ -2.11
AIF1P55008 BNIP3P6-201ENST00000549284 499 ntBASIC1.86□□□□□ -2.11
AIF1P55008 MIR3618-201ENST00000580330 88 ntBASIC1.86□□□□□ -2.11
AIF1P55008 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.86□□□□□ -2.11
AIF1P55008 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
AIF1P55008 AC012360.2-201ENST00000609349 391 ntBASIC1.86□□□□□ -2.11
AIF1P55008 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
AIF1P55008 AL132822.1-201ENST00000617063 513 ntBASIC1.86□□□□□ -2.11
AIF1P55008 AL157786.1-207ENST00000627771 695 ntBASIC1.86□□□□□ -2.11
AIF1P55008 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
AIF1P55008 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
AIF1P55008 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
AIF1P55008 RNU6-371P-201ENST00000364283 108 ntBASIC1.85□□□□□ -2.11
AIF1P55008 RNU5E-5P-201ENST00000365379 116 ntBASIC1.85□□□□□ -2.11
AIF1P55008 RNU6-641P-201ENST00000384006 107 ntBASIC1.85□□□□□ -2.11
AIF1P55008 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
AIF1P55008 MIR29B2-201ENST00000385055 81 ntBASIC1.85□□□□□ -2.11
AIF1P55008 RNA5SP465-201ENST00000391195 109 ntBASIC1.85□□□□□ -2.11
AIF1P55008 RAP1BP3-201ENST00000407180 549 ntBASIC1.85□□□□□ -2.11
AIF1P55008 TOMM20P4-201ENST00000427861 435 ntBASIC1.85□□□□□ -2.11
AIF1P55008 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.85□□□□□ -2.11
AIF1P55008 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.85□□□□□ -2.11
AIF1P55008 AP000873.5-201ENST00000533906 236 ntBASIC1.85□□□□□ -2.11
AIF1P55008 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.85□□□□□ -2.11
AIF1P55008 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.85□□□□□ -2.11
AIF1P55008 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.85□□□□□ -2.11
AIF1P55008 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.85□□□□□ -2.11
AIF1P55008 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms